RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PHACTR4Q8IZ21 702 aa5.53□□□□□ -1.52
PSPC1-205ENST00000497722 ENOX1Q8TC92 643 aaKnown RBP5.53□□□□□ -1.52
PSPC1-205ENST00000497722 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
PSPC1-205ENST00000497722 MYLIPQ8WY64 445 aa5.53□□□□□ -1.52
PSPC1-205ENST00000497722 EAF1Q96JC9 268 aaPredicted RBP5.53□□□□□ -1.52
PSPC1-205ENST00000497722 RAC2P15153 192 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 POLR2BP30876 1174 aaKnown RBP5.52□□□□□ -1.53
PSPC1-205ENST00000497722 GBP1P32455 592 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 NBPF9Q3BBW0 867 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 MPZL3Q6UWV2 235 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 USHBP1Q8N6Y0 703 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 SHISA4Q96DD7 197 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 RNF32Q9H0A6 362 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.52□□□□□ -1.53
PSPC1-205ENST00000497722 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 KCNK12Q9HB15 430 aa5.52□□□□□ -1.53
PSPC1-205ENST00000497722 TNFRSF10CO14798 259 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 EFEMP2O95967 443 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 C1QTNF9P0C862 333 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 LTKP29376 864 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 CCNFP41002 786 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 NMIQ13287 307 aaPredicted RBP5.51□□□□□ -1.53
PSPC1-205ENST00000497722 MLECQ14165 292 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 SEZ6Q53EL9 994 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 LILRA2Q8N149 483 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 FBXO15Q8NCQ5 510 aaPredicted RBP5.51□□□□□ -1.53
PSPC1-205ENST00000497722 NSUN3Q9H649 340 aaKnown RBP5.51□□□□□ -1.53
PSPC1-205ENST00000497722 C19orf44Q9H6X5 657 aa5.51□□□□□ -1.53
PSPC1-205ENST00000497722 FITM1A5D6W6 292 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 MED14OSP0DP75 135 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 NME1P15531 152 aaKnown RBP5.5□□□□□ -1.53
PSPC1-205ENST00000497722 RAG1P15918 1043 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 RNF4P78317 190 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 FANCCQ00597 558 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 APOBRQ0VD83 1088 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 SNW1Q13573 536 aaKnown RBP5.5□□□□□ -1.53
PSPC1-205ENST00000497722 NLRC3Q7RTR2 1065 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 TMC3Q7Z5M5 1100 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 RELTQ969Z4 430 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 DIRC2Q96SL1 478 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 BACH2Q9BYV9 841 aa5.5□□□□□ -1.53
PSPC1-205ENST00000497722 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 ZNF165P49910 485 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 RAD51AP2Q09MP3 1159 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 CIAPIN1Q6FI81 312 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 RNF111Q6ZNA4 994 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 GK5Q6ZS86 529 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 OXR1Q8N573 874 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 ZNF655Q8N720 491 aaPredicted RBP5.49□□□□□ -1.53
PSPC1-205ENST00000497722 TMEM87AQ8NBN3 555 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
PSPC1-205ENST00000497722 TCTN2Q96GX1 697 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 CD320Q9NPF0 282 aa5.49□□□□□ -1.53
PSPC1-205ENST00000497722 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 ACRP10323 421 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 HOXA5P20719 270 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 CEBPAP49715 358 aaPredicted RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 SNX17Q15036 470 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 LRRFIP1Q32MZ4 808 aaKnown RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 BBS9Q3SYG4 887 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 IRF2BP1Q8IU81 584 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 KIAA0825Q8IV33 1275 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 ANKS4BQ8N8V4 417 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 LINC00116Q8NCU8 138 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 NKD1Q969G9 470 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 SLC9A7Q96T83 725 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 SPON2Q9BUD6 331 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 PRDM14Q9GZV8 571 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 EPB41L4BQ9H329 900 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 CWC22Q9HCG8 908 aaKnown RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 METTL5Q9NRN9 209 aaKnown RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 ZNRF3Q9ULT6 936 aa5.48□□□□□ -1.53
PSPC1-205ENST00000497722 YBX2Q9Y2T7 364 aaKnown RBP5.48□□□□□ -1.53
PSPC1-205ENST00000497722 SIGLEC6O43699 453 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 PSPNO60542 156 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 PRAMEF1O95521 474 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 GLDCP23378 1020 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 ZNF76P36508 570 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 CHRNEQ04844 493 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 CLEC16AQ2KHT3 1053 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 INTS3Q68E01 1043 aaKnown RBP5.47□□□□□ -1.53
PSPC1-205ENST00000497722 NLRX1Q86UT6 975 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 SPPL2CQ8IUH8 684 aa5.47□□□□□ -1.53
PSPC1-205ENST00000497722 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 SHOXO15266 292 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 CLEC3AO75596 197 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 VAMP1P23763 118 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 RACK1P63244 317 aaKnown RBP5.46□□□□□ -1.54
PSPC1-205ENST00000497722 DUSP4Q13115 394 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 KCNA10Q16322 511 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 TAB3Q8N5C8 712 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-205ENST00000497722 INTS4Q96HW7 963 aaKnown RBP5.46□□□□□ -1.54
PSPC1-205ENST00000497722 MAP6Q96JE9 813 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 ZNF512BQ96KM6 892 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-205ENST00000497722 FOXP3Q9BZS1 431 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 ZNF552Q9H707 407 aaPredicted RBP5.46□□□□□ -1.54
PSPC1-205ENST00000497722 TCFL5Q9UL49 500 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms