RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 TSPY2A6NKD2 308 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 GJB1P08034 283 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 PTPREP23469 700 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 PPP4R3BQ5MIZ7 849 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 GMCL1P1Q8NEA9 526 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 SHCBP1Q8NEM2 672 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 IL17RBQ9NRM6 502 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 PPP1R9AQ9ULJ8 1098 aa22.15■■□□□ 1.14
RPN1-208ENST00000497415 SLC15A5A6NIM6 579 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 RAD21O60216 631 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 HMGCRP04035 888 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 CYP2B6P20813 491 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 RGS2P41220 211 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 NOVP48745 357 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 DSCC1Q9BVC3 393 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 NBPF3Q9H094 633 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 RNF208Q9H0X6 261 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.13
RPN1-208ENST00000497415 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
RPN1-208ENST00000497415 RANBP6O60518 1105 aaKnown RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 PCP11498 1178 aaKnown RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 MAP2K5Q13163 448 aa22.13■■□□□ 1.13
RPN1-208ENST00000497415 TRMT44Q8IYL2 757 aaKnown RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 LRRC47Q8N1G4 583 aaKnown RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 NKX2-3Q8TAU0 364 aa22.13■■□□□ 1.13
RPN1-208ENST00000497415 STAG1Q8WVM7 1258 aa22.13■■□□□ 1.13
RPN1-208ENST00000497415 TRIB2Q92519 343 aa22.13■■□□□ 1.13
RPN1-208ENST00000497415 NUP88Q99567 741 aaPredicted RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 CWC22Q9HCG8 908 aaKnown RBP22.13■■□□□ 1.13
RPN1-208ENST00000497415 VWA5AO00534 786 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 GJA8P48165 433 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 HAND2P61296 217 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 GRB14Q14449 540 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 TMEM132BQ14DG7 1078 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 AKNAD1Q5T1N1 836 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 WDR78Q5VTH9 848 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 REPS2Q8NFH8 660 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 SHISA4Q96DD7 197 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 IL25Q9H293 177 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 TCP11L1Q9NUJ3 509 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 ZNF236Q9UL36 1845 aa22.12■■□□□ 1.13
RPN1-208ENST00000497415 STRNO43815 780 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 NMT2O60551 498 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 HOXC6P09630 235 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 ERCC3P19447 782 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 SLFN13Q68D06 897 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 APBA2Q99767 749 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 SLF1Q9BQI6 1058 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 MROH8Q9H579 483 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 PAK6Q9NQU5 681 aaPredicted RBP22.11■■□□□ 1.13
RPN1-208ENST00000497415 IVNS1ABPQ9Y6Y0 642 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 BRCA2P51587 3418 aa22.11■■□□□ 1.13
RPN1-208ENST00000497415 RAD50Q92878 1312 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 ZNF213O14771 459 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 CHMLP26374 656 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 TRIM32Q13049 653 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 PLS1Q14651 629 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 MAP3K21Q5TCX8 1036 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 SAMD1Q6SPF0 538 aaPredicted RBP22.1■■□□□ 1.13
RPN1-208ENST00000497415 MFSD6Q6ZSS7 791 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 CENPQQ7L2Z9 268 aaPredicted RBP22.1■■□□□ 1.13
RPN1-208ENST00000497415 TBC1D10CQ8IV04 446 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 PRPF38AQ8NAV1 312 aaKnown RBP22.1■■□□□ 1.13
RPN1-208ENST00000497415 TOMM22Q9NS69 142 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 ZNF214Q9UL59 606 aaPredicted RBP22.1■■□□□ 1.13
RPN1-208ENST00000497415 STX8Q9UNK0 236 aa22.1■■□□□ 1.13
RPN1-208ENST00000497415 PDE4DIPQ5VU43 2346 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 SGPL1O95470 568 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 SLC25A27O95847 323 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 CAPN2P17655 700 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 RRP12Q5JTH9 1297 aaKnown RBP22.09■■□□□ 1.13
RPN1-208ENST00000497415 RIOX2Q8IUF8 465 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 U2AF1L4Q8WU68 220 aaKnown RBP22.09■■□□□ 1.13
RPN1-208ENST00000497415 GMCL1Q96IK5 515 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 RNF41Q9H4P4 317 aaPredicted RBP22.09■■□□□ 1.13
RPN1-208ENST00000497415 FEM1BQ9UK73 627 aa22.09■■□□□ 1.13
RPN1-208ENST00000497415 ZNFX1Q9P2E3 1918 aaKnown RBP22.09■■□□□ 1.13
RPN1-208ENST00000497415 RPTORQ8N122 1335 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 BMP3P12645 472 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 ZKSCAN1P17029 563 aaPredicted RBP22.08■■□□□ 1.13
RPN1-208ENST00000497415 STAT3P40763 770 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 NT5C2P49902 561 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 CCL14Q16627 93 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 NCAPG2Q86XI2 1143 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 ABRAQ8N0Z2 381 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 RUFY2Q8WXA3 655 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.08■■□□□ 1.13
RPN1-208ENST00000497415 CTNNA3Q9UI47 895 aa22.08■■□□□ 1.13
RPN1-208ENST00000497415 NPLOC4Q8TAT6 608 aa22.07■■□□□ 1.12
RPN1-208ENST00000497415 HMX1Q9NP08 348 aaPredicted RBP22.07■■□□□ 1.12
RPN1-208ENST00000497415 ATP2A1O14983 1001 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 PLA2G6O60733 806 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 IGHA2P01877 340 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 ADORA2AP29274 412 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 COPB2P35606 906 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 SLC1A4P43007 532 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 DEFB118Q96PH6 123 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 CRISPLD2Q9H0B8 497 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 FLRT1Q9NZU1 646 aa22.06■■□□□ 1.12
RPN1-208ENST00000497415 NEDD4P46934 1319 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms