RNA–Protein interactions for RNA: ENST00000497146.5

PTGER3-211, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-211ENST00000497146 NFIAQ12857 509 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 NOM1Q5C9Z4 860 aaKnown RBP24.65■■□□□ 1.54
PTGER3-211ENST00000497146 PDGFDQ9GZP0 370 aaPredicted RBP24.65■■□□□ 1.54
PTGER3-211ENST00000497146 IGKV6D-41A0A0C4DH26 115 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 AKR1B1P15121 316 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 SPECC1Q5M775 1068 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 TTC38Q5R3I4 469 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 DAGLBQ8NCG7 672 aa24.65■■□□□ 1.54
PTGER3-211ENST00000497146 GPKOWQ92917 476 aaPredicted RBP eCLIP24.65■■□□□ 1.54
PTGER3-211ENST00000497146 RRP36Q96EU6 259 aaKnown RBP24.65■■□□□ 1.54
PTGER3-211ENST00000497146 GOLGA8HP0CJ92 632 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 SHMT1P34896 483 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 ASPRV1Q53RT3 343 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 SOGA3Q5TF21 947 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 KRBA2Q6ZNG9 492 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 PIK3AP1Q6ZUJ8 805 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 HEATR3Q7Z4Q2 680 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 CCDC34Q96HJ3 373 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 PI4KBQ9UBF8 816 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 TUBE1Q9UJT0 475 aa24.64■■□□□ 1.54
PTGER3-211ENST00000497146 BECN2A8MW95 431 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 WWC2Q6AWC2 1192 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 DHX40Q8IX18 779 aaKnown RBP24.63■■□□□ 1.53
PTGER3-211ENST00000497146 CNNM3Q8NE01 707 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 VPS33BQ9H267 617 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 hCG_1984214I3L0E3 225 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 WNT7AO00755 349 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 PDHBP11177 359 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 NLRP12P59046 1061 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 TYW1BQ6NUM6 668 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 USP17L2Q6R6M4 530 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 ZNF713Q8N859 430 aaPredicted RBP24.63■■□□□ 1.53
PTGER3-211ENST00000497146 TRIM34Q9BYJ4 488 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 CSRNP2Q9H175 543 aa24.63■■□□□ 1.53
PTGER3-211ENST00000497146 ADAMTS3O15072 1205 aa24.62■■□□□ 1.53
PTGER3-211ENST00000497146 ZNF174Q15697 407 aa24.62■■□□□ 1.53
PTGER3-211ENST00000497146 DPCR1Q3MIW9 517 aa24.62■■□□□ 1.53
PTGER3-211ENST00000497146 RASGRP2Q7LDG7 609 aa24.62■■□□□ 1.53
PTGER3-211ENST00000497146 BPIFA3Q9BQP9 254 aa24.62■■□□□ 1.53
PTGER3-211ENST00000497146 MYH4Q9Y623 1939 aa24.61■■□□□ 1.53
PTGER3-211ENST00000497146 COL2A1P02458 1487 aaPredicted RBP24.61■■□□□ 1.53
PTGER3-211ENST00000497146 CCDC194A0A1B0GVG4 234 aa24.61■■□□□ 1.53
PTGER3-211ENST00000497146 STXBP3O00186 592 aa24.61■■□□□ 1.53
PTGER3-211ENST00000497146 ATP2C1P98194 919 aaPredicted RBP24.61■■□□□ 1.53
PTGER3-211ENST00000497146 METTL16Q86W50 562 aaKnown RBP24.61■■□□□ 1.53
PTGER3-211ENST00000497146 PLA2G4DQ86XP0 818 aa24.61■■□□□ 1.53
PTGER3-211ENST00000497146 ZSCAN29Q8IWY8 852 aaPredicted RBP24.61■■□□□ 1.53
PTGER3-211ENST00000497146 SIPA1L1O43166 1804 aa24.61■■□□□ 1.53
PTGER3-211ENST00000497146 YDJCA8MPS7 323 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 GOLGA6L6A8MZA4 724 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 M0R2N6 131 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 SNHG28P0DPA3 235 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 MDM2Q00987 491 aaPredicted RBP24.6■■□□□ 1.53
PTGER3-211ENST00000497146 KANK3Q6NY19 840 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 SARM1Q6SZW1 724 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 ZFPM1Q8IX07 1006 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 TRIM5Q9C035 493 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 PCDHAC2Q9Y5I4 1007 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 BIN1O00499 593 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 MPHOSPH10O00566 681 aaKnown RBP24.6■■□□□ 1.53
PTGER3-211ENST00000497146 ENTPD3O75355 529 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 DPEP1P16444 411 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 GNA11P29992 359 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 ZNF75DP51815 510 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 TCP10Q12799 353 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 PNOCQ13519 176 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 LRRC47Q8N1G4 583 aaKnown RBP24.6■■□□□ 1.53
PTGER3-211ENST00000497146 FAM198AQ9UFP1 575 aa24.6■■□□□ 1.53
PTGER3-211ENST00000497146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTGER3-211ENST00000497146 ATRNL1Q5VV63 1379 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 USP17L5A8MUK1 530 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 POLR2DO15514 142 aaKnown RBP24.59■■□□□ 1.53
PTGER3-211ENST00000497146 CCDC125Q86Z20 511 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 FOXP4Q8IVH2 680 aaPredicted RBP24.59■■□□□ 1.53
PTGER3-211ENST00000497146 LARGE2Q8N3Y3 721 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 ZMYND12Q9H0C1 365 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 RIOX1Q9H6W3 641 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 CLIP2Q9UDT6 1046 aa24.59■■□□□ 1.53
PTGER3-211ENST00000497146 GOLGB1Q14789 3259 aaKnown RBP24.59■■□□□ 1.53
PTGER3-211ENST00000497146 ZNF500O60304 480 aaPredicted RBP24.58■■□□□ 1.53
PTGER3-211ENST00000497146 CACNB3P54284 484 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 NAPAP54920 295 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 PTGDRQ13258 359 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 CFAP100Q494V2 611 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 USP49Q70CQ1 688 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 CPVLQ9H3G5 476 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 C6orf50Q9HD87 102 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 TMOD2Q9NZR1 351 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 HDAC9Q9UKV0 1011 aa24.58■■□□□ 1.53
PTGER3-211ENST00000497146 GPATCH4Q5T3I0 446 aaKnown RBP24.58■■□□□ 1.52
PTGER3-211ENST00000497146 ARL6IP4Q66PJ3 421 aaKnown RBP24.58■■□□□ 1.52
PTGER3-211ENST00000497146 RSBN1LQ6PCB5 846 aaPredicted RBP24.58■■□□□ 1.52
PTGER3-211ENST00000497146 HOMER1Q86YM7 354 aa24.58■■□□□ 1.52
PTGER3-211ENST00000497146 TPM3P06753 285 aa24.57■■□□□ 1.52
PTGER3-211ENST00000497146 KCNA3P22001 575 aa24.57■■□□□ 1.52
PTGER3-211ENST00000497146 EIF6P56537 245 aaKnown RBP24.57■■□□□ 1.52
PTGER3-211ENST00000497146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.57■■□□□ 1.52
PTGER3-211ENST00000497146 AOPEPQ8N6M6 819 aa24.57■■□□□ 1.52
PTGER3-211ENST00000497146 PYM1Q9BRP8 204 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms