RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 GPRC5AQ8NFJ5 357 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 TGFBRAP1Q8WUH2 860 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 SOCS4Q8WXH5 440 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 USP6NLQ92738 828 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 HERC5Q9UII4 1024 aaKnown RBP8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 PALD1Q9ULE6 856 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 ZBTB21Q9ULJ3 1066 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 AKAP2Q9Y2D5 859 aa8.53□□□□□ -1.04
CHCHD3-206ENST00000496427 PNMA6EA0A0J9YXQ4 647 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L10C9JJH3 530 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 CNMDO75829 334 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 ASNSP08243 561 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 HOXA7P31268 230 aaPredicted RBP8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 RGS2P41220 211 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 DYNLL1P63167 89 aaKnown RBP8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 MORN1Q5T089 497 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 WDR78Q5VTH9 848 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 PLEKHH3Q7Z736 793 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 CRACR2BQ8N4Y2 399 aaPredicted RBP8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 APBA2Q99767 749 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 LRP2BPQ9P2M1 347 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 PRUNE2Q8WUY3 3088 aa8.52□□□□□ -1.05
CHCHD3-206ENST00000496427 MYH4Q9Y623 1939 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 ACTN4O43707 911 aaKnown RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 XRCC5P13010 732 aaKnown RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 MAPK4P31152 587 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 MAP2K5Q13163 448 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 ANO1Q5XXA6 986 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 NAA16Q6N069 864 aaPredicted RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 CCAR1Q8IX12 1150 aaKnown RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 NPLOC4Q8TAT6 608 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 EMID1Q96A84 441 aaPredicted RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 DBNDD2Q9BQY9 259 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 NOL10Q9BSC4 688 aaKnown RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 API5Q9BZZ5 524 aaKnown RBP8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
CHCHD3-206ENST00000496427 C19orf81C9J6K1 198 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 MAP4K4O95819 1239 aaPredicted RBP8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 GH2P01242 217 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 CNGA1P29973 690 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 CYP2C19P33261 490 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 RTP1P59025 263 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 MYO9BQ13459 2157 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 MTX1Q13505 466 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 C9orf50Q5SZB4 431 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 TRPV1Q8NER1 839 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 FEZ1Q99689 392 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 PIH1D3Q9NQM4 214 aaKnown RBP8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 BTBD7Q9P203 1132 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 ATP11BQ9Y2G3 1177 aa8.5□□□□□ -1.05
CHCHD3-206ENST00000496427 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 GDF9O60383 454 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 CYP2E1P05181 493 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 UQCRFS1P1P0C7P4 283 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 ZAP70P43403 619 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 GJC2Q5T442 439 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 MIGA1Q8NAN2 632 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 ACER1Q8TDN7 264 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 EDC3Q96F86 508 aaKnown RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 LBHD1Q9BQE6 289 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 DHX36Q9H2U1 1008 aaKnown RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 TMEM134Q9H6X4 195 aa8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 TLR7Q9NYK1 1049 aaKnown RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 DDX20Q9UHI6 824 aaKnown RBP8.49□□□□□ -1.05
CHCHD3-206ENST00000496427 FAM187AA6NFU0 413 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 TLL1O43897 1013 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 BAG3O95817 575 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 S1PR4O95977 384 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 ADH1BP00325 375 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 GNAI3P08754 354 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 VCAM1P19320 739 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 RARSP54136 660 aaKnown RBP8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 G3BP1Q13283 466 aaKnown RBP eCLIP8.48□□□□□ -1.051e-7■■■□□ 15.2
CHCHD3-206ENST00000496427 RAB3GAP1Q15042 981 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 SHHQ15465 462 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 METTL16Q86W50 562 aaKnown RBP8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 TRMT2AQ8IZ69 625 aaKnown RBP8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 HDAC5Q9UQL6 1122 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 RABGAP1Q9Y3P9 1069 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 FPGT-TNNI3KV9GXZ4 949 aa8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 TCF20Q9UGU0 1960 aaKnown RBP8.48□□□□□ -1.05
CHCHD3-206ENST00000496427 GREB1LQ9C091 1923 aaPredicted RBP8.47□□□□□ -1.05
CHCHD3-206ENST00000496427 SLC15A5A6NIM6 579 aa8.47□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L15C9J2P7 530 aa8.47□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L13C9JLJ4 530 aa8.47□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L11C9JVI0 530 aa8.47□□□□□ -1.05
CHCHD3-206ENST00000496427 USP17L18D6R9N7 530 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms