RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 F5H6K3 240 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 ORC4O43929 436 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 KLRC3Q07444 240 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 PDE4DQ08499 809 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 CCDC84Q86UT8 332 aaPredicted RBP10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 STAT6P42226 847 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 LIFRP42702 1097 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 SNAPC2Q13487 334 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 C16orf86Q6ZW13 317 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 NEDD1Q8NHV4 660 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
GAPVD1-219ENST00000495955 SORBS3O60504 671 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 BLIDQ8IZY5 108 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 RNF214Q8ND24 703 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 RPAP3Q9H6T3 665 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 BTAF1O14981 1849 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 SPTLC2O15270 562 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 CTNND1O60716 968 aaKnown RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 MCM4P33991 863 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 NLRX1Q86UT6 975 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 COA7Q96BR5 231 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 ZNF541Q9H0D2 1346 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 TBCAO75347 108 aaKnown RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 TXKP42681 527 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 GNPTABQ3T906 1256 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 CERS5Q8N5B7 392 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 AFDNP55196 1824 aaKnown RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 TTC38Q5R3I4 469 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 PYM1Q9BRP8 204 aaKnown RBP10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 PPP2R3BQ9Y5P8 575 aa10.75□□□□□ -0.69
GAPVD1-219ENST00000495955 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 CCDC192P0DO97 292 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 UBXN2AP68543 259 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 GRIK5Q16478 980 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 RCSD1Q6JBY9 416 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 PLIN2Q99541 437 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 RIOK1Q9BRS2 568 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 KDM3BQ7LBC6 1761 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 GLTPD2A6NH11 291 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 MYCP01106 439 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 MB21D2Q8IYB1 491 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 SPC25Q9HBM1 224 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 NOD1Q9Y239 953 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 POTEB2H3BUK9 544 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 NCAPH2Q6IBW4 605 aa10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 APOBEC3HQ6NTF7 200 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L15C9J2P7 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L13C9JLJ4 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L11C9JVI0 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L18D6R9N7 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L22D6RA61 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L17D6RBQ6 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L19D6RCP7 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L20D6RJB6 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 USP17L24Q0WX57 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 LRRC27Q9C0I9 530 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 MLXIPQ9HAP2 919 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 SYKP43405 635 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 CNKSR2Q8WXI2 1034 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 RNF26Q9BY78 433 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 MTMR4Q9NYA4 1195 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 CCL15-CCL14A0A0B4J2E2 113 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 YDJCA8MPS7 323 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 NFKBIEO00221 500 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 RASA1P20936 1047 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 AFMP43652 599 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 TAF1CQ15572 869 aaPredicted RBP10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 CCL15Q16663 113 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 PRR16Q569H4 304 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 SNRNP48Q6IEG0 339 aaKnown RBP10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 MAP3K11Q16584 847 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 CALCRLQ16602 461 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 ADD3Q9UEY8 706 aaKnown RBP10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 PCDHAC2Q9Y5I4 1007 aa10.73□□□□□ -0.69
GAPVD1-219ENST00000495955 C19orf81C9J6K1 198 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 INF2Q27J81 1249 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 RRAGBQ5VZM2 374 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 MCTP2Q6DN12 878 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 FAM83AQ86UY5 434 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 DHX58Q96C10 678 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 BICD1Q96G01 975 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 CCT6AP40227 531 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 SMC1BQ8NDV3 1235 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 CETPP11597 493 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms