RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.73□□□□□ -0.05
PTPN7-217ENST00000495688 FAM205AQ6ZU69 1335 aa14.73□□□□□ -0.05
PTPN7-217ENST00000495688 TRIM49BA6NDI0 452 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 DDAH1O94760 285 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 BMP15O95972 392 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 TXLNAP40222 546 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 UBE4AQ14139 1066 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 SMC1AQ14683 1233 aaKnown RBP14.72□□□□□ -0.05
PTPN7-217ENST00000495688 NAA15Q9BXJ9 866 aaKnown RBP14.72□□□□□ -0.05
PTPN7-217ENST00000495688 PP2D1A8MPX8 630 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 CALM1P0DP23 149 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 CALM2P0DP24 149 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 CALM3P0DP25 149 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 KIF4BQ2VIQ3 1234 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 CT47A1Q5JQC4 288 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-217ENST00000495688 SRGAP1Q7Z6B7 1085 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 CNGA4Q8IV77 575 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 NELFBQ8WX92 580 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 NUP88Q99567 741 aaPredicted RBP14.72□□□□□ -0.05
PTPN7-217ENST00000495688 ANKZF1Q9H8Y5 726 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 ABHD10Q9NUJ1 306 aa14.72□□□□□ -0.05
PTPN7-217ENST00000495688 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 KCNQ2O43526 872 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 COPB1P53618 953 aaKnown RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 PAK1Q13153 545 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 DDB1Q16531 1140 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 LONRF2Q1L5Z9 754 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 EEF2KMTQ96G04 330 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 PNKPQ96T60 521 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 PLIN2Q99541 437 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 CHP1Q99653 195 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 SLF1Q9BQI6 1058 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 BSDC1Q9NW68 430 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 CDC23Q9UJX2 597 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 MTMR7Q9Y216 660 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 SEMA3EO15041 775 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 PRCPP42785 496 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 PFKFB3Q16875 520 aaPredicted RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 TCP11X2Q5H9J9 407 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 RCSD1Q6JBY9 416 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 TYW1BQ6NUM6 668 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 STAG2Q8N3U4 1231 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 NEK11Q8NG66 645 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 SUGCTQ9HAC7 445 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 TRIM10Q9UDY6 481 aa14.71□□□□□ -0.05
PTPN7-217ENST00000495688 LIMA1Q9UHB6 759 aaKnown RBP14.71□□□□□ -0.05
PTPN7-217ENST00000495688 LRRC10BA6NIK2 292 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 TSPY2A6NKD2 308 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 KCNJ18B7U540 433 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 PMS1P54277 932 aaKnown RBP14.7□□□□□ -0.06
PTPN7-217ENST00000495688 KCNJ12Q14500 433 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 SLC51AQ86UW1 340 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 RWDD2AQ9UIY3 292 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 TFR2Q9UP52 801 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 A0A1B0GUL6 1792 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 STRCQ7RTU9 1775 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 RPN1P04843 607 aaKnown RBP14.7□□□□□ -0.06
PTPN7-217ENST00000495688 KRT9P35527 623 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 IRF2BP1Q8IU81 584 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 ITIH6Q6UXX5 1313 aa14.7□□□□□ -0.06
PTPN7-217ENST00000495688 GTPBP6O43824 516 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-217ENST00000495688 ADAMTS2O95450 1211 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 USP17L8P0C7I0 530 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 ARHGAP25P42331 645 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 ZNF658Q5TYW1 1059 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-217ENST00000495688 TXNRD3Q86VQ6 643 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 CTAGE9A4FU28 777 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 H3BQF6 201 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 ATP8B1O43520 1251 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 ORC4O43929 436 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 RHOXF2BP0C7M4 288 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 FECHP22830 423 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 UBXN1Q04323 297 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 WWC2Q6AWC2 1192 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 RHOXF2Q9BQY4 288 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 CCDC151A5D8V7 595 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 PES1O00541 588 aaKnown RBP14.69□□□□□ -0.06
PTPN7-217ENST00000495688 GTF2E1P29083 439 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-217ENST00000495688 STAT6P42226 847 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 SF3B3Q15393 1217 aaKnown RBP14.69□□□□□ -0.06
PTPN7-217ENST00000495688 NAALADL2Q58DX5 795 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 TMEM60Q9H2L4 133 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 MCM9Q9NXL9 1143 aa14.69□□□□□ -0.06
PTPN7-217ENST00000495688 DLEC1Q9Y238 1755 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 CCDC66A2RUB6 948 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 ZBTB22O15209 634 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 MCM6Q14566 821 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 TMTC1Q8IUR5 882 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 LRRC15Q8TF66 581 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 DYNLL2Q96FJ2 89 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 CRNKL1Q9BZJ0 848 aaKnown RBP14.68□□□□□ -0.06
PTPN7-217ENST00000495688 IL17RBQ9NRM6 502 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 TTF2Q9UNY4 1162 aaKnown RBP14.68□□□□□ -0.06
PTPN7-217ENST00000495688 REXO2Q9Y3B8 237 aaKnown RBP14.68□□□□□ -0.06
PTPN7-217ENST00000495688 TTC26A0AVF1 554 aa14.68□□□□□ -0.06
PTPN7-217ENST00000495688 PCP11498 1178 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms