RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ENAHQ8N8S7 591 aaPredicted RBP15.93■□□□□ 0.14
COL1A1-208ENST00000494334 GPRC5AQ8NFJ5 357 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 CHMP4CQ96CF2 233 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 GMCL1Q96IK5 515 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 PAGR1Q9BTK6 254 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 EFCC1Q9HA90 598 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 BTBD7Q9P203 1132 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 TRIM17Q9Y577 477 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 MYPNQ86TC9 1320 aa15.93■□□□□ 0.14
COL1A1-208ENST00000494334 SLC1A4P43007 532 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 PSMC4P43686 418 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 ERVK-9P63128 1117 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 ERVK-24P63145 666 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 COL9A3Q14050 684 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-208ENST00000494334 SEC23AQ15436 765 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 TSGA10IPQ3SY00 556 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-208ENST00000494334 RASGRP2Q7LDG7 609 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 CHST3Q7LGC8 479 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 ATG4CQ96DT6 458 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 UBAC1Q9BSL1 405 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 ADAMTS5Q9UNA0 930 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 MTMR7Q9Y216 660 aa15.92■□□□□ 0.14
COL1A1-208ENST00000494334 EPB41L2O43491 1005 aaKnown RBP15.91■□□□□ 0.14
COL1A1-208ENST00000494334 FMNL1O95466 1100 aaPredicted RBP15.91■□□□□ 0.14
COL1A1-208ENST00000494334 HSPA4P34932 840 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 FCGRTP55899 365 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 ANTXR2P58335 489 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 KCNB2Q92953 911 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 TRIM47Q96LD4 638 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 SLF1Q9BQI6 1058 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 MCOLN1Q9GZU1 580 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 FEM1BQ9UK73 627 aa15.91■□□□□ 0.14
COL1A1-208ENST00000494334 MYH4Q9Y623 1939 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 TMEM232C9JQI7 657 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 IFIT3O14879 490 aaKnown RBP15.9■□□□□ 0.14
COL1A1-208ENST00000494334 PDHBP11177 359 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 ZKSCAN1P17029 563 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-208ENST00000494334 IFIT1BQ5T764 474 aaKnown RBP15.9■□□□□ 0.14
COL1A1-208ENST00000494334 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 MB21D1Q8N884 522 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
COL1A1-208ENST00000494334 PNMA1Q8ND90 353 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 IGDCC4Q8TDY8 1250 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 DCAF4Q8WV16 495 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 KAT14Q9H8E8 782 aa15.9■□□□□ 0.14
COL1A1-208ENST00000494334 VWA5AO00534 786 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 GNRH1P01148 92 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 SNHG28P0DPA3 235 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 MCM5P33992 734 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 PKN2Q16513 984 aaKnown RBP15.89■□□□□ 0.13
COL1A1-208ENST00000494334 ADCK5Q3MIX3 580 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 REPS2Q8NFH8 660 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 NEK1Q96PY6 1258 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 PORCNQ9H237 461 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 SENP2Q9HC62 589 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 ISY1Q9ULR0 285 aaKnown RBP15.89■□□□□ 0.13
COL1A1-208ENST00000494334 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
COL1A1-208ENST00000494334 RLFQ13129 1914 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 ERICH2A1L162 156 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 TNPO2O14787 897 aaKnown RBP15.88■□□□□ 0.13
COL1A1-208ENST00000494334 PRC1O43663 620 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 PLA2G6O60733 806 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 HOXD10P28358 340 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 STAT2P52630 851 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 KRT32Q14532 448 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 TMEM132BQ14DG7 1078 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
COL1A1-208ENST00000494334 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 TTBK2Q6IQ55 1244 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 FAM160B2Q86V87 743 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 TNS4Q8IZW8 715 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 CHURC1Q8WUH1 139 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 KIFC2Q96AC6 838 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 SPATC1LQ9H0A9 340 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 SNX14Q9Y5W7 946 aa15.88■□□□□ 0.13
COL1A1-208ENST00000494334 FRMPD2Q68DX3 1309 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-208ENST00000494334 MAPK4P31152 587 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 CCNA1P78396 465 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 ZNF543Q08ER8 600 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 IKQ13123 557 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-208ENST00000494334 WTAPQ15007 396 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 TMEM67Q5HYA8 995 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 FBXO46Q6PJ61 603 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-208ENST00000494334 MOV10L1Q9BXT6 1211 aaKnown RBP15.87■□□□□ 0.13
COL1A1-208ENST00000494334 GPCPD1Q9NPB8 672 aa15.87■□□□□ 0.13
COL1A1-208ENST00000494334 GPHNQ9NQX3 736 aaPredicted RBP15.87■□□□□ 0.13
COL1A1-208ENST00000494334 ZBED4O75132 1171 aa15.86■□□□□ 0.13
COL1A1-208ENST00000494334 SLC16A2P36021 539 aa15.86■□□□□ 0.13
COL1A1-208ENST00000494334 PRMT2P55345 433 aa15.86■□□□□ 0.13
COL1A1-208ENST00000494334 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
COL1A1-208ENST00000494334 PRKCZQ05513 592 aa15.86■□□□□ 0.13
COL1A1-208ENST00000494334 PLS1Q14651 629 aa15.86■□□□□ 0.13
COL1A1-208ENST00000494334 BTNL9Q6UXG8 535 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms