RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.35■■□□□ 1.01
NUP50-218ENST00000493456 CCDC17Q96LX7 622 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 MMP19Q99542 508 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 TINF2Q9BSI4 451 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 MYH8P13535 1937 aa21.35■■□□□ 1.01
NUP50-218ENST00000493456 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
NUP50-218ENST00000493456 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 TCRBV5S4A2TA0A5A2 114 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 RAG1P15918 1043 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 ITGB8P26012 769 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 COPB2P35606 906 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 RIOX2Q8IUF8 465 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 SIAH1Q8IUQ4 282 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 LCORLQ8N3X6 602 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 PRDM6Q9NQX0 595 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 ADAMTS5Q9UNA0 930 aa21.34■■□□□ 1.01
NUP50-218ENST00000493456 CYP2D6P10635 497 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 AKR1A1P14550 325 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 AKR1B1P15121 316 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 KCTD2Q14681 263 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 CLEC10AQ8IUN9 316 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 ATP8A2Q9NTI2 1148 aa21.33■■□□□ 1.01
NUP50-218ENST00000493456 TTC28Q96AY4 2481 aa21.33■■□□□ 1
NUP50-218ENST00000493456 PQBP1O60828 265 aaKnown RBP21.32■■□□□ 1
NUP50-218ENST00000493456 PGK1P00558 417 aa21.32■■□□□ 1
NUP50-218ENST00000493456 FPGSQ05932 587 aa21.32■■□□□ 1
NUP50-218ENST00000493456 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
NUP50-218ENST00000493456 SAMD1Q6SPF0 538 aaPredicted RBP21.32■■□□□ 1
NUP50-218ENST00000493456 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
NUP50-218ENST00000493456 TOX2Q96NM4 488 aa21.32■■□□□ 1
NUP50-218ENST00000493456 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
NUP50-218ENST00000493456 GOLIM4O00461 696 aa21.31■■□□□ 1
NUP50-218ENST00000493456 PGK2P07205 417 aa21.31■■□□□ 1
NUP50-218ENST00000493456 RLBP1P12271 317 aa21.31■■□□□ 1
NUP50-218ENST00000493456 EPHB4P54760 987 aa21.31■■□□□ 1
NUP50-218ENST00000493456 ANKRD33Q7Z3H0 272 aa21.31■■□□□ 1
NUP50-218ENST00000493456 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
NUP50-218ENST00000493456 DNAJC2Q99543 621 aaKnown RBP21.31■■□□□ 1
NUP50-218ENST00000493456 IL1RAPL2Q9NP60 686 aa21.31■■□□□ 1
NUP50-218ENST00000493456 TMEM39AQ9NV64 488 aa21.31■■□□□ 1
NUP50-218ENST00000493456 CNPY2Q9Y2B0 182 aa21.31■■□□□ 1
NUP50-218ENST00000493456 COL11A1P12107 1806 aaPredicted RBP21.31■■□□□ 1
NUP50-218ENST00000493456 ZNFX1Q9P2E3 1918 aaKnown RBP21.31■■□□□ 1
NUP50-218ENST00000493456 VWA5AO00534 786 aa21.3■■□□□ 1
NUP50-218ENST00000493456 ZNF865P0CJ78 1059 aaPredicted RBP21.3■■□□□ 1
NUP50-218ENST00000493456 STAT3P40763 770 aa21.3■■□□□ 1
NUP50-218ENST00000493456 CLASRPQ8N2M8 674 aaKnown RBP21.3■■□□□ 1
NUP50-218ENST00000493456 MSL3Q8N5Y2 521 aaKnown RBP21.3■■□□□ 1
NUP50-218ENST00000493456 NUP133Q8WUM0 1156 aa21.3■■□□□ 1
NUP50-218ENST00000493456 ARMT1Q9H993 441 aa21.3■■□□□ 1
NUP50-218ENST00000493456 KANSL2Q9H9L4 492 aa21.3■■□□□ 1
NUP50-218ENST00000493456 GOPCQ9HD26 462 aa21.3■■□□□ 1
NUP50-218ENST00000493456 PPP1R9AQ9ULJ8 1098 aa21.3■■□□□ 1
NUP50-218ENST00000493456 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
NUP50-218ENST00000493456 CHD9Q3L8U1 2897 aa21.29■■□□□ 1
NUP50-218ENST00000493456 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
NUP50-218ENST00000493456 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
NUP50-218ENST00000493456 MOXD2PA6NHM9 499 aa21.29■■□□□ 1
NUP50-218ENST00000493456 DCDC2CA8MYV0 355 aa21.29■■□□□ 1
NUP50-218ENST00000493456 ADAMTS4O75173 837 aa21.29■■□□□ 1
NUP50-218ENST00000493456 TAL1P17542 331 aaPredicted RBP21.29■■□□□ 1
NUP50-218ENST00000493456 DNAJB2P25686 324 aa21.29■■□□□ 1
NUP50-218ENST00000493456 CDK8P49336 464 aa21.29■■□□□ 1
NUP50-218ENST00000493456 STARD7Q9NQZ5 370 aa21.29■■□□□ 1
NUP50-218ENST00000493456 ZNF214Q9UL59 606 aaPredicted RBP21.29■■□□□ 1
NUP50-218ENST00000493456 SMCHD1A6NHR9 2005 aa21.29■■□□□ 1
NUP50-218ENST00000493456 MBD4O95243 580 aa21.28■■□□□ 1
NUP50-218ENST00000493456 EEF2P13639 858 aaKnown RBP21.28■■□□□ 1
NUP50-218ENST00000493456 FAAP100Q0VG06 881 aa21.28■■□□□ 1
NUP50-218ENST00000493456 C12orf60Q5U649 245 aa21.28■■□□□ 1
NUP50-218ENST00000493456 C16orf86Q6ZW13 317 aa21.28■■□□□ 1
NUP50-218ENST00000493456 KIF1BPQ96EK5 621 aa21.28■■□□□ 1
NUP50-218ENST00000493456 DDRGK1Q96HY6 314 aa21.28■■□□□ 1
NUP50-218ENST00000493456 FBXO28Q9NVF7 368 aa21.28■■□□□ 1
NUP50-218ENST00000493456 SYNGAP1Q96PV0 1343 aa21.28■■□□□ 1
NUP50-218ENST00000493456 SYNRGQ9UMZ2 1314 aa21.28■■□□□ 1
NUP50-218ENST00000493456 IFIT2P09913 472 aaKnown RBP21.27■■□□□ 1
NUP50-218ENST00000493456 ACLYP53396 1101 aa21.27■■□□□ 1
NUP50-218ENST00000493456 GRIN2CQ14957 1233 aa21.27■■□□□ 1
NUP50-218ENST00000493456 TJAP1Q5JTD0 557 aa21.27■■□□□ 1
NUP50-218ENST00000493456 REPS2Q8NFH8 660 aa21.27■■□□□ 1
NUP50-218ENST00000493456 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.27■■□□□ 1
NUP50-218ENST00000493456 MROH7Q68CQ1 1323 aa21.27■□□□□ 0.99
NUP50-218ENST00000493456 PRKAB2O43741 272 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 TIMP1P01033 207 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 ADD2P35612 726 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 CCDC174Q6PII3 467 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 LENG1Q96BZ8 264 aaPredicted RBP21.26■□□□□ 0.99
NUP50-218ENST00000493456 PAG1Q9NWQ8 432 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 FAM184BQ9ULE4 1060 aa21.26■□□□□ 0.99
NUP50-218ENST00000493456 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
NUP50-218ENST00000493456 KLHDC9Q8NEP7 349 aa21.25■□□□□ 0.99
NUP50-218ENST00000493456 TIFAQ96CG3 184 aa21.25■□□□□ 0.99
NUP50-218ENST00000493456 TEX13BQ9BXU2 312 aa21.25■□□□□ 0.99
NUP50-218ENST00000493456 ZNF576Q9H609 170 aa21.25■□□□□ 0.99
NUP50-218ENST00000493456 CYP2D7A0A087X1C5 515 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
NUP50-218ENST00000493456 USP17L21D6R901 530 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms