RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 FOXP4Q8IVH2 680 aaPredicted RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 CLASRPQ8N2M8 674 aaKnown RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 DNAJC2Q99543 621 aaKnown RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 RIOK1Q9BRS2 568 aaKnown RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 NOL10Q9BSC4 688 aaKnown RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 ZCCHC17Q9NP64 241 aaKnown RBP8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 PI4KBQ9UBF8 816 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 PCDHB15Q9Y5E8 787 aa8.9□□□□□ -0.98
PRPF4B-208ENST00000490653 ZNF532Q9HCE3 1301 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 TCRBV5S4A2TA0A5A2 114 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 RAB11FIP3O75154 756 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 IFIT2P09913 472 aaKnown RBP8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 CYP2D6P10635 497 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 PDE6AP16499 860 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 USP5P45974 858 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 MMP16P51512 607 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 HMGCS2P54868 508 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 HSP90AB4PQ58FF6 505 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 TSHZ3Q63HK5 1081 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 FASTKD5Q7L8L6 764 aaKnown RBP8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 PTPRFP10586 1907 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 DOCK1Q14185 1865 aa8.89□□□□□ -0.99
PRPF4B-208ENST00000490653 MYH1P12882 1939 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 HMMRO75330 724 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 SMPD1P17405 629 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 MAP3K12Q12852 859 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 NFX1Q12986 1120 aaKnown RBP8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 SLC9C2Q5TAH2 1124 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 LCORLQ8N3X6 602 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 SNIP1Q8TAD8 396 aaKnown RBP8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 SDR42E1Q8WUS8 393 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 YTHDC1Q96MU7 727 aaKnown RBP8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 P2RX7Q99572 595 aaKnown RBP8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 DHX36Q9H2U1 1008 aaKnown RBP8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 ARMT1Q9H993 441 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 SRRDQ9UH36 339 aa8.88□□□□□ -0.99
PRPF4B-208ENST00000490653 ATAD5Q96QE3 1844 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 CYP2D7A0A087X1C5 515 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 MAGEB6P1A0A0J9YX57 407 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 GH2P01242 217 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 ATP5JP18859 108 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 GUCY1A2P33402 732 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 GJA8P48165 433 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 PRKCZQ05513 592 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 TRIM32Q13049 653 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 MTMR2Q13614 643 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 KIF22Q14807 665 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 Q3C1V9 767 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 SH3D19Q5HYK7 790 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 CRACR2BQ8N4Y2 399 aaPredicted RBP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 ANKRD13CQ8N6S4 541 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 ACER1Q8TDN7 264 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 OTUD7AQ8TE49 926 aaPredicted RBP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 DYNLL2Q96FJ2 89 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 PARK7Q99497 189 aaKnown RBP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 HAUS7Q99871 368 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 WDR18Q9BV38 432 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 DCTPP1Q9H773 170 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 PAG1Q9NWQ8 432 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 HERC5Q9UII4 1024 aaKnown RBP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 AGTPBP1Q9UPW5 1226 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 COL2A1P02458 1487 aaPredicted RBP8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 FOCADQ5VW36 1801 aa8.87□□□□□ -0.99
PRPF4B-208ENST00000490653 MYPNQ86TC9 1320 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 CCL5P13501 91 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 SHMT1P34896 483 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 ADD2P35612 726 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 BACE1P56817 501 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 ZYXQ15942 572 aaKnown RBP8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 SLC44A5Q8NCS7 719 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 CRBNQ96SW2 442 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 UNC93B1Q9H1C4 597 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 ASCC2Q9H1I8 757 aaPredicted RBP8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 MAST2Q6P0Q8 1798 aa8.86□□□□□ -0.99
PRPF4B-208ENST00000490653 MGAMO43451 1857 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 WIPF1O43516 503 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 MBD4O95243 580 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 HLA-DOAP06340 250 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 GJB1P08034 283 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 ELNP15502 786 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 CD46P15529 392 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 FLT3LGP49771 235 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 GABPAQ06546 454 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 TTF1Q15361 905 aaPredicted RBP8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 PROCA1Q8NCQ7 364 aaPredicted RBP8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 RAET1EQ8TD07 263 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 TRIM34Q9BYJ4 488 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 PUS7LQ9H0K6 701 aaKnown RBP8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 AS3MTQ9HBK9 375 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 TXNRD2Q9NNW7 524 aa8.85□□□□□ -0.99
PRPF4B-208ENST00000490653 DCP1AQ9NPI6 582 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms