RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 U3KQE9 123 aa5.97□□□□□ -1.45
CD46-216ENST00000490278 ANKRD34BA5PLL1 514 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 RBAK-RBAKDNI3L0D1 243 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 PDPK1O15530 556 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 CBFA2T2O43439 604 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 SUSD5O60279 629 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 TGFB1P01137 390 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 CD247P20963 164 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 NETO1Q8TDF5 533 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 PRDM14Q9GZV8 571 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 KLHL25Q9H0H3 589 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 GBP3Q9H0R5 595 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 ASCC2Q9H1I8 757 aaPredicted RBP5.96□□□□□ -1.46
CD46-216ENST00000490278 EPN3Q9H201 632 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 PIF1Q9H611 641 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 ZNF451Q9Y4E5 1061 aa5.96□□□□□ -1.46
CD46-216ENST00000490278 FAM221BA6H8Z2 402 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 SNW1Q13573 536 aaKnown RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 IFI16Q16666 785 aaKnown RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 SPACA3Q8IXA5 215 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 PLD6Q8N2A8 252 aaKnown RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 ST13P5Q8NFI4 369 aaPredicted RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 APBA2Q99767 749 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 GP6Q9HCN6 339 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 PRR13Q9NZ81 148 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 WHRNQ9P202 907 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 ZC3H7BQ9UGR2 993 aaKnown RBP5.95□□□□□ -1.46
CD46-216ENST00000490278 SUSD2Q9UGT4 822 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 PLAGL2Q9UPG8 496 aa5.95□□□□□ -1.46
CD46-216ENST00000490278 SIGLEC6O43699 453 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 ITGA4P13612 1032 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 GRIK1P39086 918 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 CLCN7P51798 805 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 IFRD2Q12894 506 aaPredicted RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 NOL9Q5SY16 702 aaKnown RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 CDKAL1Q5VV42 579 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 TMC3Q7Z5M5 1100 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 ADAT2Q7Z6V5 191 aaKnown RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 NOP9Q86U38 636 aaKnown RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 ENOX1Q8TC92 643 aaKnown RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 FGD4Q96M96 766 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 GPR62Q9BZJ7 368 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 TRIT1Q9H3H1 467 aaKnown RBP5.94□□□□□ -1.46
CD46-216ENST00000490278 GPATCH2Q9NW75 528 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 SNX11Q9Y5W9 270 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
CD46-216ENST00000490278 TMEM265A0A087WTH1 108 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 A0A087WZG4 1122 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 PPM1BO75688 479 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 SRFP11831 508 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 HOXA10P31260 410 aaPredicted RBP5.93□□□□□ -1.46
CD46-216ENST00000490278 ZNF445P59923 1031 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 CLEC16AQ2KHT3 1053 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 SLC10A6Q3KNW5 377 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 SV2CQ496J9 727 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 MTERF2Q49AM1 385 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 INTS5Q6P9B9 1019 aaKnown RBP5.93□□□□□ -1.46
CD46-216ENST00000490278 ZNF669Q96BR6 464 aaPredicted RBP5.93□□□□□ -1.46
CD46-216ENST00000490278 HSPA12BQ96MM6 686 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 DUSP15Q9H1R2 295 aaPredicted RBP5.93□□□□□ -1.46
CD46-216ENST00000490278 CHST7Q9NS84 486 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 GFOD1Q9NXC2 390 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 SUGT1Q9Y2Z0 365 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 FHOD1Q9Y613 1164 aa5.93□□□□□ -1.46
CD46-216ENST00000490278 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 H3BS24 57 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 AGRPO00253 132 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 COBLO75128 1261 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 MSMPQ1L6U9 139 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 THAP5Q7Z6K1 395 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 ADCY4Q8NFM4 1077 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 SYTL5Q8TDW5 730 aaPredicted RBP5.92□□□□□ -1.46
CD46-216ENST00000490278 BRF1Q92994 677 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 PPP1R14AQ96A00 147 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 DNAJC7Q99615 494 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 HDAC8Q9BY41 377 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 APEX2Q9UBZ4 518 aa5.92□□□□□ -1.46
CD46-216ENST00000490278 DIS3Q9Y2L1 958 aaKnown RBP5.92□□□□□ -1.46
CD46-216ENST00000490278 SCO2A0A1W2PP80 73 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 IQCA1LA6NCM1 817 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 SPATC1Q76KD6 591 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 TSPYL5Q86VY4 417 aaPredicted RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 FIBCD1Q8N539 461 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 ZNF655Q8N720 491 aaPredicted RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 ZNF513Q8N8E2 541 aaPredicted RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 DAGLBQ8NCG7 672 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 BVESQ8NE79 360 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 UBE2FQ969M7 185 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
CD46-216ENST00000490278 HRASLS5Q96KN8 279 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 DSCC1Q9BVC3 393 aa5.91□□□□□ -1.46
CD46-216ENST00000490278 NOL6Q9H6R4 1146 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 476.4 ms