RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 FEM1BQ9UK73 627 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 ADAMTS5Q9UNA0 930 aa13.03□□□□□ -0.32
CPSF7-212ENST00000489728 MGAMO43451 1857 aa13.02□□□□□ -0.32
CPSF7-212ENST00000489728 BMP3P12645 472 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 ZKSCAN1P17029 563 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-212ENST00000489728 HOXD10P28358 340 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 SLC1A4P43007 532 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 ERVK-24P63145 666 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 OTOP1Q7RTM1 612 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 ENAHQ8N8S7 591 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-212ENST00000489728 PRPF38AQ8NAV1 312 aaKnown RBP13.02□□□□□ -0.33
CPSF7-212ENST00000489728 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 TMEM47Q9BQJ4 181 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 PPP1R9AQ9ULJ8 1098 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 TNKSO95271 1327 aa13.02□□□□□ -0.33
CPSF7-212ENST00000489728 ERICH2A1L162 156 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 RAD21O60216 631 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 MAPK4P31152 587 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 COPB2P35606 906 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 PSMC4P43686 418 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 STAT2P52630 851 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 FBXO46Q6PJ61 603 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-212ENST00000489728 STOX1Q6ZVD7 989 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 MB21D2Q8IYB1 491 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-212ENST00000489728 SHCBP1Q8NEM2 672 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 CHURC1Q8WUH1 139 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 KCNB2Q92953 911 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
CPSF7-212ENST00000489728 VWA5AO00534 786 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 ATP2A1O14983 1001 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
CPSF7-212ENST00000489728 PDHBP11177 359 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 MCM5P33992 734 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 HSPA4P34932 840 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 SEC23AQ15436 765 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
CPSF7-212ENST00000489728 IFIT1BQ5T764 474 aaKnown RBP13□□□□□ -0.33
CPSF7-212ENST00000489728 CYB5R4Q7L1T6 521 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 PNMA1Q8ND90 353 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 COA7Q96BR5 231 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 TMEM87BQ96K49 555 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 TRIM47Q96LD4 638 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 TRIM17Q9Y577 477 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
CPSF7-212ENST00000489728 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
CPSF7-212ENST00000489728 CNMDO75829 334 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-212ENST00000489728 MCCP23508 829 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 OAZ1P54368 228 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 BTNL9Q6UXG8 535 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-212ENST00000489728 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 PAGR1Q9BTK6 254 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 SRRDQ9UH36 339 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 PNMA2Q9UL42 364 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
CPSF7-212ENST00000489728 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
CPSF7-212ENST00000489728 SLC25A27O95847 323 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 CTGFP29279 349 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 ZNF543Q08ER8 600 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 IRF5Q13568 498 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 ASPRV1Q53RT3 343 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
CPSF7-212ENST00000489728 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 MROH8Q9H579 483 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 FBXO28Q9NVF7 368 aa12.98□□□□□ -0.33
CPSF7-212ENST00000489728 ZNF214Q9UL59 606 aaPredicted RBP12.98□□□□□ -0.33
CPSF7-212ENST00000489728 ZSWIM8A7E2V4 1837 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 COL11A1P12107 1806 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-212ENST00000489728 HTTP42858 3142 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 TMEM232C9JQI7 657 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 PRC1O43663 620 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 STRNO43815 780 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 ZBED4O75132 1171 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 ANTXR2P58335 489 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 CAP1Q01518 475 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 WTAPQ15007 396 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 CCDC96Q2M329 555 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 TMEM67Q5HYA8 995 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
CPSF7-212ENST00000489728 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms