RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 ANKS4BQ8N8V4 417 aa5.74□□□□□ -1.49
NF1-213ENST00000489712 SLC6A18Q96N87 628 aa5.74□□□□□ -1.49
NF1-213ENST00000489712 FERD3LQ96RJ6 166 aa5.74□□□□□ -1.49
NF1-213ENST00000489712 DIRC2Q96SL1 478 aa5.74□□□□□ -1.49
NF1-213ENST00000489712 EPB41L4BQ9H329 900 aa5.74□□□□□ -1.49
NF1-213ENST00000489712 NSUN3Q9H649 340 aaKnown RBP5.74□□□□□ -1.49
NF1-213ENST00000489712 SSU72P8A0A1W2PR75 194 aa5.73□□□□□ -1.49
NF1-213ENST00000489712 SIGLEC6O43699 453 aa5.73□□□□□ -1.49
NF1-213ENST00000489712 TRHRP34981 398 aaPredicted RBP5.73□□□□□ -1.49
NF1-213ENST00000489712 PCBP3P57721 371 aaKnown RBP5.73□□□□□ -1.49
NF1-213ENST00000489712 SNW1Q13573 536 aaKnown RBP5.73□□□□□ -1.49
NF1-213ENST00000489712 NR0B2Q15466 257 aa5.73□□□□□ -1.49
NF1-213ENST00000489712 FBXO15Q8NCQ5 510 aaPredicted RBP5.73□□□□□ -1.49
NF1-213ENST00000489712 ZNF512BQ96KM6 892 aaPredicted RBP5.73□□□□□ -1.49
NF1-213ENST00000489712 RNF32Q9H0A6 362 aa5.73□□□□□ -1.49
NF1-213ENST00000489712 DBX1A6NMT0 343 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 PRAMEF1O95521 474 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 TSPAN15O95858 294 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 FZD5Q13467 585 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 SPPL2CQ8IUH8 684 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 TMEM192Q8IY95 271 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 TCTN2Q96GX1 697 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 SLC9A7Q96T83 725 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 FOXP3Q9BZS1 431 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 SLC6A17Q9H1V8 727 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 SP110Q9HB58 689 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 GPR160Q9UJ42 338 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 TCFL5Q9UL49 500 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 PCDHB12Q9Y5F1 795 aa5.72□□□□□ -1.49
NF1-213ENST00000489712 RPL10P27635 214 aaKnown RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 SYDE1Q6ZW31 735 aaPredicted RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 WAPLQ7Z5K2 1190 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 ZNF654Q8IZM8 581 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 TAB3Q8N5C8 712 aaPredicted RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 LINC00116Q8NCU8 138 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 DHRS1Q96LJ7 313 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 TM9SF2Q99805 663 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 PRDM14Q9GZV8 571 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 C19orf44Q9H6X5 657 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 DCP1AQ9NPI6 582 aaPredicted RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 CHST7Q9NS84 486 aa5.71□□□□□ -1.5
NF1-213ENST00000489712 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
NF1-213ENST00000489712 FAM86C2PA6NEL3 165 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 NFIBO00712 420 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 USP2O75604 605 aaPredicted RBP5.7□□□□□ -1.5
NF1-213ENST00000489712 SYPP08247 313 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 ENDOUP21128 410 aaKnown RBP5.7□□□□□ -1.5
NF1-213ENST00000489712 RAP1GAPP47736 663 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 SNX17Q15036 470 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 BBS9Q3SYG4 887 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 FBXW10Q5XX13 1052 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 INTS3Q68E01 1043 aaKnown RBP5.7□□□□□ -1.5
NF1-213ENST00000489712 IRF2BP1Q8IU81 584 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 USHBP1Q8N6Y0 703 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 LINC01599Q8WXQ3 324 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 INTS4Q96HW7 963 aaKnown RBP5.7□□□□□ -1.5
NF1-213ENST00000489712 MAP6Q96JE9 813 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 G6PC3Q9BUM1 346 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 GFOD1Q9NXC2 390 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 PRR13Q9NZ81 148 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 SUCOQ9UBS9 1254 aaKnown RBP5.7□□□□□ -1.5
NF1-213ENST00000489712 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 FBXL21Q9UKT6 434 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 PPT2Q9UMR5 302 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 ZNF281Q9Y2X9 895 aa5.7□□□□□ -1.5
NF1-213ENST00000489712 FKTNO75072 461 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 ACRP10323 421 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 RACK1P63244 317 aaKnown RBP5.69□□□□□ -1.5
NF1-213ENST00000489712 COL9A2Q14055 689 aaPredicted RBP5.69□□□□□ -1.5
NF1-213ENST00000489712 CCDC144CPQ8IYA2 1237 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 SMARCC1Q92922 1105 aaPredicted RBP5.69□□□□□ -1.5
NF1-213ENST00000489712 MRRFQ96E11 262 aaKnown RBP5.69□□□□□ -1.5
NF1-213ENST00000489712 SPATA32Q96LK8 384 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 KRTAP9-4Q9BYQ2 154 aa5.69□□□□□ -1.5
NF1-213ENST00000489712 YBX2Q9Y2T7 364 aaKnown RBP5.69□□□□□ -1.5
NF1-213ENST00000489712 TMEM82A0PJX8 343 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 GUCY2CP25092 1073 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 KIR2DL1P43626 348 aaPredicted RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 KIR2DL2P43627 348 aaPredicted RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 PMS1P54277 932 aaKnown RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 PAK2Q13177 524 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 AUHQ13825 339 aaKnown RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 SLC14A2Q15849 920 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 RBBP8NLQ8NC74 664 aaPredicted RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 FCRL2Q96LA5 508 aaPredicted RBP5.68□□□□□ -1.5
NF1-213ENST00000489712 SLC26A8Q96RN1 970 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 EBF1Q9UH73 591 aa5.68□□□□□ -1.5
NF1-213ENST00000489712 MEIS1O00470 390 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 BMP8BP34820 402 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 TDRD10Q5VZ19 366 aaKnown RBP5.67□□□□□ -1.5
NF1-213ENST00000489712 CEP128Q6ZU80 1094 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 METTL16Q86W50 562 aaKnown RBP5.67□□□□□ -1.5
NF1-213ENST00000489712 LSRQ86X29 649 aaPredicted RBP5.67□□□□□ -1.5
NF1-213ENST00000489712 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 GPRASP2Q96D09 838 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 TOX2Q96NM4 488 aa5.67□□□□□ -1.5
NF1-213ENST00000489712 CRBNQ96SW2 442 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms