RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ZNF512BQ96KM6 892 aaPredicted RBP7.72□□□□□ -1.17
SMC4-219ENST00000487747 FOXP3Q9BZS1 431 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 MCOLN1Q9GZU1 580 aa7.72□□□□□ -1.17
SMC4-219ENST00000487747 YBX2Q9Y2T7 364 aaKnown RBP7.72□□□□□ -1.17
SMC4-219ENST00000487747 KRTAP9-7A8MTY7 169 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 RPL10P27635 214 aaKnown RBP7.71□□□□□ -1.18
SMC4-219ENST00000487747 KCNA10Q16322 511 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 ZPBP2Q6X784 338 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 GK5Q6ZS86 529 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 EHMT1Q9H9B1 1298 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 GPR160Q9UJ42 338 aa7.71□□□□□ -1.18
SMC4-219ENST00000487747 SMG5Q9UPR3 1016 aaKnown RBP7.71□□□□□ -1.18
SMC4-219ENST00000487747 TMEM82A0PJX8 343 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 GLDCP23378 1020 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 MLECQ14165 292 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 CDCP2Q5VXM1 449 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 ZNF605Q86T29 641 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 SIRT2Q8IXJ6 389 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 ZSCAN18Q8TBC5 510 aaPredicted RBP7.7□□□□□ -1.18
SMC4-219ENST00000487747 ENOX1Q8TC92 643 aaKnown RBP7.7□□□□□ -1.18
SMC4-219ENST00000487747 SYTL5Q8TDW5 730 aaPredicted RBP7.7□□□□□ -1.18
SMC4-219ENST00000487747 INTS4Q96HW7 963 aaKnown RBP7.7□□□□□ -1.18
SMC4-219ENST00000487747 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 CNNM2Q9H8M5 875 aa7.7□□□□□ -1.18
SMC4-219ENST00000487747 USP2O75604 605 aaPredicted RBP7.69□□□□□ -1.18
SMC4-219ENST00000487747 HS2ST1Q7LGA3 356 aa7.69□□□□□ -1.18
SMC4-219ENST00000487747 WAPLQ7Z5K2 1190 aa7.69□□□□□ -1.18
SMC4-219ENST00000487747 DAGLBQ8NCG7 672 aa7.69□□□□□ -1.18
SMC4-219ENST00000487747 PRDM14Q9GZV8 571 aa7.69□□□□□ -1.18
SMC4-219ENST00000487747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.69□□□□□ -1.187e-12■■■■■ 38.5
SMC4-219ENST00000487747 CWC22Q9HCG8 908 aaKnown RBP7.69□□□□□ -1.18
SMC4-219ENST00000487747 TCAF2A6NFQ2 919 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 FKTNO75072 461 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 CHMP4BP1P59074 171 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 CHRNEQ04844 493 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 DUSP4Q13115 394 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 BBS9Q3SYG4 887 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 NLRC3Q7RTR2 1065 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 IRF2BP1Q8IU81 584 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 SPPL2CQ8IUH8 684 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 ANKS4BQ8N8V4 417 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 SYTL4Q96C24 671 aaPredicted RBP7.68□□□□□ -1.18
SMC4-219ENST00000487747 SGPP1Q9BX95 441 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 ASCC2Q9H1I8 757 aaPredicted RBP7.68□□□□□ -1.18
SMC4-219ENST00000487747 SLC6A17Q9H1V8 727 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
SMC4-219ENST00000487747 MCM4P33991 863 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 PDE6BP35913 854 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 LINC00310P59036 64 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 RNF4P78317 190 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 RNF111Q6ZNA4 994 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 NLRX1Q86UT6 975 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
SMC4-219ENST00000487747 ZNF552Q9H707 407 aaPredicted RBP7.67□□□□□ -1.18
SMC4-219ENST00000487747 ZMYM5Q9UJ78 669 aa7.67□□□□□ -1.18
SMC4-219ENST00000487747 SYPP08247 313 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 NME1P15531 152 aaKnown RBP7.66□□□□□ -1.18
SMC4-219ENST00000487747 ITGAEP38570 1179 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 DLG4P78352 724 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 KIR3DS1Q14943 382 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 ZNF326Q5BKZ1 582 aaKnown RBP7.66□□□□□ -1.18
SMC4-219ENST00000487747 SIAH1Q8IUQ4 282 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 REXO1Q8N1G1 1221 aaKnown RBP7.66□□□□□ -1.18
SMC4-219ENST00000487747 ZNF655Q8N720 491 aaPredicted RBP7.66□□□□□ -1.18
SMC4-219ENST00000487747 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 HHIPL1Q96JK4 782 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 GCM1Q9NP62 436 aa7.66□□□□□ -1.18
SMC4-219ENST00000487747 MEIS1O00470 390 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 CLEC3AO75596 197 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 SDHBP21912 280 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 SNX17Q15036 470 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 LINC00116Q8NCU8 138 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 SLC9A7Q96T83 725 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 PLCD4Q9BRC7 762 aa7.65□□□□□ -1.18
SMC4-219ENST00000487747 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 SIGLEC6O43699 453 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 PCBP3P57721 371 aaKnown RBP7.64□□□□□ -1.19
SMC4-219ENST00000487747 CEP128Q6ZU80 1094 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 AMIGO3Q86WK7 504 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 SLITRK4Q8IW52 837 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 NKD1Q969G9 470 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 SLC6A18Q96N87 628 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 NT5C1AQ9BXI3 368 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 IRF2BPLQ9H1B7 796 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 ADAMTS20P59510 1910 aa7.64□□□□□ -1.19
SMC4-219ENST00000487747 NRDCO43847 1150 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 NUAK1O60285 661 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 PEX10O60683 326 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 CTSKP43235 329 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 CEBPAP49715 358 aaPredicted RBP7.63□□□□□ -1.19
SMC4-219ENST00000487747 ADGRF1Q5T601 910 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 CIAPIN1Q6FI81 312 aa7.63□□□□□ -1.19
SMC4-219ENST00000487747 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms