RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ATAD5Q96QE3 1844 aa14.85□□□□□ -0.03
SREBF1-215ENST00000487401 F5H6K3 240 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 VWA5AO00534 786 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 COBLO75128 1261 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 PRDM1O75626 825 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 STAT3P40763 770 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 PDE4BQ07343 736 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 KLRC3Q07444 240 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 ZMYM1Q5SVZ6 1142 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
SREBF1-215ENST00000487401 MMP19Q99542 508 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 NAPBQ9H115 298 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 ADAMTS5Q9UNA0 930 aa14.84□□□□□ -0.03
SREBF1-215ENST00000487401 CTDP1Q9Y5B0 961 aaPredicted RBP14.84□□□□□ -0.03
SREBF1-215ENST00000487401 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
SREBF1-215ENST00000487401 COPB2P35606 906 aa14.83□□□□□ -0.04
SREBF1-215ENST00000487401 KCTD2Q14681 263 aa14.83□□□□□ -0.04
SREBF1-215ENST00000487401 RIOX2Q8IUF8 465 aa14.83□□□□□ -0.04
SREBF1-215ENST00000487401 NUP88Q99567 741 aaPredicted RBP14.83□□□□□ -0.04
SREBF1-215ENST00000487401 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.04
SREBF1-215ENST00000487401 PRO3102Q9H379 93 aa14.83□□□□□ -0.04
SREBF1-215ENST00000487401 MYH1P12882 1939 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 NDUFB10O96000 172 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 TSPY3P0CV98 308 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 TSPY8P0CW00 308 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 COL6A1P12109 1028 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
SREBF1-215ENST00000487401 TRPV1Q8NER1 839 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 SENP6Q9GZR1 1112 aaPredicted RBP14.82□□□□□ -0.04
SREBF1-215ENST00000487401 PFASO15067 1338 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 ROBO3Q96MS0 1386 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 MGAMO43451 1857 aa14.82□□□□□ -0.04
SREBF1-215ENST00000487401 DDX60LQ5H9U9 1706 aaKnown RBP14.81□□□□□ -0.04
SREBF1-215ENST00000487401 IGKV6D-41A0A0C4DH26 115 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 A0A1W2PPC1 479 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 ZBED4O75132 1171 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 TTLL1O95922 423 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 IGHA2P01877 340 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 CYBAP13498 195 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 SYN1P17600 705 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 TFAP4Q01664 338 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 PPARAQ07869 468 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 PRPF38AQ8NAV1 312 aaKnown RBP14.81□□□□□ -0.04
SREBF1-215ENST00000487401 ARRDC4Q8NCT1 418 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 MKL1Q969V6 931 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 EVI5LQ96CN4 794 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 CEP95Q96GE4 821 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 MAML3Q96JK9 1138 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 MTMR4Q9NYA4 1195 aa14.81□□□□□ -0.04
SREBF1-215ENST00000487401 CDK5RAP2Q96SN8 1893 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 DNM1LO00429 736 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 SEPT4O43236 478 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
SREBF1-215ENST00000487401 PGK2P07205 417 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 SLC4A3P48751 1232 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 AAMPQ13685 434 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 LRRC26Q2I0M4 334 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 FAM47AQ5JRC9 791 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 PRAMEF19Q5SWL8 479 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 REPS2Q8NFH8 660 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 KIFC2Q96AC6 838 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 TEX13BQ9BXU2 312 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 FEM1BQ9UK73 627 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 ZNF214Q9UL59 606 aaPredicted RBP14.8□□□□□ -0.04
SREBF1-215ENST00000487401 ISY1Q9ULR0 285 aaKnown RBP14.8□□□□□ -0.04
SREBF1-215ENST00000487401 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 NAV1Q8NEY1 1877 aa14.8□□□□□ -0.04
SREBF1-215ENST00000487401 BMP8BP34820 402 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 PDE1AP54750 535 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 GJC2Q5T442 439 aaPredicted RBP14.79□□□□□ -0.04
SREBF1-215ENST00000487401 ANO1Q5XXA6 986 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
SREBF1-215ENST00000487401 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 LRRC47Q8N1G4 583 aaKnown RBP14.79□□□□□ -0.04
SREBF1-215ENST00000487401 GMCL1P1Q8NEA9 526 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 GDF15Q99988 308 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 RWDD1Q9H446 243 aaPredicted RBP14.79□□□□□ -0.04
SREBF1-215ENST00000487401 NRBP1Q9UHY1 535 aa14.79□□□□□ -0.04
SREBF1-215ENST00000487401 DIS3Q9Y2L1 958 aaKnown RBP14.79□□□□□ -0.04
SREBF1-215ENST00000487401 SALL3Q9BXA9 1300 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 KBTBD13C9JR72 458 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 BMP3P12645 472 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 MAGEA10P43363 369 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-215ENST00000487401 ATN1P54259 1190 aaPredicted RBP14.78□□□□□ -0.04
SREBF1-215ENST00000487401 ZNF792Q3KQV3 632 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 TINF2Q9BSI4 451 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 HELLSQ9NRZ9 838 aa14.78□□□□□ -0.04
SREBF1-215ENST00000487401 TSPY2A6NKD2 308 aa14.77□□□□□ -0.05
SREBF1-215ENST00000487401 CTDSPL2Q05D32 466 aa14.77□□□□□ -0.05
SREBF1-215ENST00000487401 UBE2OQ9C0C9 1292 aaKnown RBP14.77□□□□□ -0.05
SREBF1-215ENST00000487401 LNPKQ9C0E8 428 aa14.77□□□□□ -0.05
SREBF1-215ENST00000487401 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
SREBF1-215ENST00000487401 CNPY2Q9Y2B0 182 aa14.77□□□□□ -0.05
SREBF1-215ENST00000487401 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
SREBF1-215ENST00000487401 ATP2A1O14983 1001 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms