RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 MAP3K21Q5TCX8 1036 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 SAMD1Q6SPF0 538 aaPredicted RBP8.87□□□□□ -0.99
CPNE1-226ENST00000486021 FAM160B2Q86V87 743 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 RIOX2Q8IUF8 465 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 USP6NLQ92738 828 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 OSBP2Q969R2 916 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 MKL1Q969V6 931 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 SHISA4Q96DD7 197 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 DDX11Q96FC9 970 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 MMP19Q99542 508 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 MPHOSPH6Q99547 160 aaKnown RBP8.87□□□□□ -0.99
CPNE1-226ENST00000486021 SLF1Q9BQI6 1058 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 MOV10L1Q9BXT6 1211 aaKnown RBP8.87□□□□□ -0.99
CPNE1-226ENST00000486021 CLIP2Q9UDT6 1046 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 DDX20Q9UHI6 824 aaKnown RBP8.87□□□□□ -0.99
CPNE1-226ENST00000486021 PPP1R9AQ9ULJ8 1098 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 MYH6P13533 1939 aa8.87□□□□□ -0.99
CPNE1-226ENST00000486021 A0A1W2PRG0 241 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 F5H6K3 240 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 CYP2D6P10635 497 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 RASA1P20936 1047 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 STAT2P52630 851 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 KLRC3Q07444 240 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 PPARAQ07869 468 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 ZMYM1Q5SVZ6 1142 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 RCSD1Q6JBY9 416 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 UBE2Q1Q7Z7E8 422 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 SPICE1Q8N0Z3 855 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 SLC44A5Q8NCS7 719 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 GMCL1P1Q8NEA9 526 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 YTHDC1Q96MU7 727 aaKnown RBP8.86□□□□□ -0.99
CPNE1-226ENST00000486021 CRBNQ96SW2 442 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 TEX13BQ9BXU2 312 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 RNF41Q9H4P4 317 aaPredicted RBP8.86□□□□□ -0.99
CPNE1-226ENST00000486021 SPC25Q9HBM1 224 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 BTBD7Q9P203 1132 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 ISY1Q9ULR0 285 aaKnown RBP8.86□□□□□ -0.99
CPNE1-226ENST00000486021 ADAMTS5Q9UNA0 930 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 CNPY2Q9Y2B0 182 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 PCDHB15Q9Y5E8 787 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 ALPK3Q96L96 1907 aa8.86□□□□□ -0.99
CPNE1-226ENST00000486021 B4DLN1 442 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 H0YGN5 161 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 DNM1LO00429 736 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 VWA5AO00534 786 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 SEPT4O43236 478 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 CNMDO75829 334 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 BMP3P12645 472 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 MRPL12P52815 198 aaKnown RBP8.85□□□□□ -0.99
CPNE1-226ENST00000486021 PDE1AP54750 535 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 ALX1Q15699 326 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-226ENST00000486021 TKFCQ3LXA3 575 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 FAM83BQ5T0W9 1011 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 RNF180Q86T96 592 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 CHST13Q8NET6 341 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 NEDD1Q8NHV4 660 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 PI4K2BQ8TCG2 481 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 RILPL2Q969X0 211 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 ATG4CQ96DT6 458 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 LBHD1Q9BQE6 289 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-226ENST00000486021 TOMM22Q9NS69 142 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 PLIN4Q96Q06 1357 aa8.85□□□□□ -0.99
CPNE1-226ENST00000486021 ZMYM6O95789 1325 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 CYP2D7A0A087X1C5 515 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 SMCHD1A6NHR9 2005 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 ATP2A1O14983 1001 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
CPNE1-226ENST00000486021 PLA2G6O60733 806 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 RARBP10826 455 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 BMP8BP34820 402 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 SLC1A4P43007 532 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 TFAP4Q01664 338 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 SNRNP48Q6IEG0 339 aaKnown RBP8.84□□□□□ -0.99
CPNE1-226ENST00000486021 CHRDL2Q6WN34 429 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 STK11IPQ8N1F8 1099 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 ANKRD35Q8N283 1001 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 TTC14Q96N46 770 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 CTNNA3Q9UI47 895 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 ANAPC4Q9UJX5 808 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 STX8Q9UNK0 236 aa8.84□□□□□ -0.99
CPNE1-226ENST00000486021 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
CPNE1-226ENST00000486021 PFASO15067 1338 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 LAMA4Q16363 1823 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 M0R2C6 588 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 AKR1A1P14550 325 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 CCND3P30281 292 aaPredicted RBP8.83□□□□□ -1
CPNE1-226ENST00000486021 TMEM132BQ14DG7 1078 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 CCL14Q16627 93 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 SLFN13Q68D06 897 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 MFSD6Q6ZSS7 791 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 ZNF467Q7Z7K2 595 aaPredicted RBP8.83□□□□□ -1
CPNE1-226ENST00000486021 CHD1LQ86WJ1 897 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 IQCA1Q86XH1 822 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 C7orf61Q8IZ16 206 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 NPLOC4Q8TAT6 608 aa8.83□□□□□ -1
CPNE1-226ENST00000486021 NUP133Q8WUM0 1156 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms