RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CNGA1P29973 690 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 CYP2C19P33261 490 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 ZMYM1Q5SVZ6 1142 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 FAM83BQ5T0W9 1011 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 OLFML2BQ68BL8 750 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 ABRAQ8N0Z2 381 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 DDX20Q9UHI6 824 aaKnown RBP11.26□□□□□ -0.61
NUP50-215ENST00000484186 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 RLFQ13129 1914 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 SALL3Q9BXA9 1300 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 CEP290O15078 2479 aa11.26□□□□□ -0.61
NUP50-215ENST00000484186 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 F5H6K3 240 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 VWA5AO00534 786 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 MSCO60682 206 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 PRDM1O75626 825 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 COL6A1P12109 1028 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 FCER1AP12319 257 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 STAT3P40763 770 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 KLRC3Q07444 240 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 HDAC1Q13547 482 aaPredicted RBP11.25□□□□□ -0.61
NUP50-215ENST00000484186 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 C7orf61Q8IZ16 206 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 TRPV1Q8NER1 839 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 MKL1Q969V6 931 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 CLIP2Q9UDT6 1046 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 PFASO15067 1338 aa11.25□□□□□ -0.61
NUP50-215ENST00000484186 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
NUP50-215ENST00000484186 CYBAP13498 195 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 PDE4BQ07343 736 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 REPS2Q8NFH8 660 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 NAPBQ9H115 298 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 STAP2Q9UGK3 403 aa11.24□□□□□ -0.61
NUP50-215ENST00000484186 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
NUP50-215ENST00000484186 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 A0A1W2PPC1 479 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 NDUFB10O96000 172 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 COPB2P35606 906 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 PDE1AP54750 535 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 PPARAQ07869 468 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 AAMPQ13685 434 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 KCTD2Q14681 263 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
NUP50-215ENST00000484186 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 EVI5LQ96CN4 794 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 YTHDC1Q96MU7 727 aaKnown RBP11.23□□□□□ -0.61
NUP50-215ENST00000484186 MMP19Q99542 508 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
NUP50-215ENST00000484186 GDF15Q99988 308 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
NUP50-215ENST00000484186 SYNPO2Q9UMS6 1093 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 ALPK3Q96L96 1907 aa11.23□□□□□ -0.61
NUP50-215ENST00000484186 SEPT4O43236 478 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 TTLL1O95922 423 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 SYN1P17600 705 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 BMP8BP34820 402 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 TFAP4Q01664 338 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 PRAMEF19Q5SWL8 479 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 CCDC129Q6ZRS4 1044 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 GREB1LQ9C091 1923 aaPredicted RBP11.22□□□□□ -0.61
NUP50-215ENST00000484186 SENP6Q9GZR1 1112 aaPredicted RBP11.22□□□□□ -0.61
NUP50-215ENST00000484186 ZNF236Q9UL36 1845 aa11.22□□□□□ -0.61
NUP50-215ENST00000484186 DIS3Q9Y2L1 958 aaKnown RBP11.22□□□□□ -0.61
NUP50-215ENST00000484186 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 DNM1LO00429 736 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 FOXP2O15409 715 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 ZBED4O75132 1171 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 PGK2P07205 417 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
NUP50-215ENST00000484186 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 HELLSQ9NRZ9 838 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
NUP50-215ENST00000484186 CTDP1Q9Y5B0 961 aaPredicted RBP11.21□□□□□ -0.61
NUP50-215ENST00000484186 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.62
NUP50-215ENST00000484186 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 ALX1Q15699 326 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 GJC2Q5T442 439 aaPredicted RBP11.2□□□□□ -0.62
NUP50-215ENST00000484186 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 SLFN13Q68D06 897 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
NUP50-215ENST00000484186 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms