RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RBM43Q6ZSC3 357 aaKnown RBP16.16■□□□□ 0.18
CLK3-204ENST00000483723 TMEM179Q6ZVK1 233 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 NR1I2O75469 434 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 CALML3P27482 149 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 RASSF7Q02833 373 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
CLK3-204ENST00000483723 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 RASGRP2Q7LDG7 609 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
CLK3-204ENST00000483723 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 FUCA2Q9BTY2 467 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 MYOZ2Q9NPC6 264 aa16.16■□□□□ 0.18
CLK3-204ENST00000483723 M0R2N6 131 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 MPHOSPH10O00566 681 aaKnown RBP16.15■□□□□ 0.18
CLK3-204ENST00000483723 NLRP5P59047 1200 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
CLK3-204ENST00000483723 DAGLBQ8NCG7 672 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 NUP62CLQ9H1M0 184 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 GOLPH3LQ9H4A5 285 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 CLSTN2Q9H4D0 955 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 BARHL2Q9NY43 387 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
CLK3-204ENST00000483723 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 STXBP3O00186 592 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 MYO1BO43795 1136 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 EEF2P13639 858 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 CMA1P23946 247 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 EIF6P56537 245 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 ABCB5Q2M3G0 1257 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 EARS2Q5JPH6 523 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 MRPS27Q92552 414 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 RBSNQ9H1K0 784 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 SYNPO2Q9UMS6 1093 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 DICER1Q9UPY3 1922 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 SHTN1A0MZ66 631 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 JAG1P78504 1218 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 FAM160A1Q05DH4 1040 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 SEPT2Q15019 361 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 SHROOM1Q2M3G4 852 aaPredicted RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 NBPF9Q3BBW0 867 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 GPATCH4Q5T3I0 446 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 BLIDQ8IZY5 108 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 FSIP1Q8NA03 581 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 RRP36Q96EU6 259 aaKnown RBP16.14■□□□□ 0.17
CLK3-204ENST00000483723 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
CLK3-204ENST00000483723 PCDHA4Q9UN74 947 aa16.14■□□□□ 0.17
CLK3-204ENST00000483723 CUTAO60888 179 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 FMR1NBQ8N0W7 255 aaPredicted RBP16.13■□□□□ 0.17
CLK3-204ENST00000483723 CCDC148Q8NFR7 591 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 GPKOWQ92917 476 aaPredicted RBP eCLIP16.13■□□□□ 0.17
CLK3-204ENST00000483723 MTMR8Q96EF0 704 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
CLK3-204ENST00000483723 FAM205CA6NFA0 338 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 hCG_1984214I3L0E3 225 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 ADAMTS3O15072 1205 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
CLK3-204ENST00000483723 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 GMPSP49915 693 aaPredicted RBP16.12■□□□□ 0.17
CLK3-204ENST00000483723 ZNF713Q8N859 430 aaPredicted RBP16.12■□□□□ 0.17
CLK3-204ENST00000483723 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 ZMYND12Q9H0C1 365 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 VEZTQ9HBM0 779 aa16.12■□□□□ 0.17
CLK3-204ENST00000483723 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
CLK3-204ENST00000483723 CTAGE5O15320 804 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 GDF11O95390 407 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 PTPREP23469 700 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 MAP3K11Q16584 847 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 GMCL1P1Q8NEA9 526 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 PIGSQ96S52 555 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 TNMDQ9H2S6 317 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
CLK3-204ENST00000483723 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 HPSEQ9Y251 543 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 BMP15O95972 392 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 GH2P01242 217 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 ICA1Q05084 483 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
CLK3-204ENST00000483723 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
CLK3-204ENST00000483723 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
CLK3-204ENST00000483723 TMEM39BQ9GZU3 492 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 GPCPD1Q9NPB8 672 aa16.11■□□□□ 0.17
CLK3-204ENST00000483723 CNOT7Q9UIV1 285 aaKnown RBP16.11■□□□□ 0.17
CLK3-204ENST00000483723 FBXO2Q9UK22 296 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms