RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 KLHL25Q9H0H3 589 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 TRIM39Q9HCM9 518 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 APEX2Q9UBZ4 518 aa7.03□□□□□ -1.28
COPA-203ENST00000481040 C9IYK1 514 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 AKAP10O43572 662 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PLIN1O60240 522 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 UBOX5O94941 541 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 NPTXRO95502 500 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 CAPNS1P04632 268 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 SLFN14P0C7P3 912 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 POU3F2P20265 443 aaPredicted RBP7.02□□□□□ -1.29
COPA-203ENST00000481040 ALAS2P22557 587 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 GRIA2P42262 883 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 ITKQ08881 620 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PCBP1Q15365 356 aaKnown RBP eCLIP7.02□□□□□ -1.29
COPA-203ENST00000481040 DHCR24Q15392 516 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PPM1JQ5JR12 505 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PKN3Q6P5Z2 889 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 C14orf80Q86SX3 495 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 CHPFQ8IZ52 775 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 MYO1HQ8N1T3 1032 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 ZNF513Q8N8E2 541 aaPredicted RBP7.02□□□□□ -1.29
COPA-203ENST00000481040 SLC7A14Q8TBB6 771 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 FGD4Q96M96 766 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 SMAD5Q99717 465 aaKnown RBP7.02□□□□□ -1.29
COPA-203ENST00000481040 LGR4Q9BXB1 951 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PRDM6Q9NQX0 595 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PICK1Q9NRD5 415 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 ZIM2Q9NZV7 527 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 NDOR1Q9UHB4 597 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 PCDHGC5Q9Y5F6 944 aa7.02□□□□□ -1.29
COPA-203ENST00000481040 TNPO3Q9Y5L0 923 aaKnown RBP7.02□□□□□ -1.29
COPA-203ENST00000481040 GPR39O43194 453 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 CBFA2T2O43439 604 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 CLEC3AO75596 197 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 KRT18P05783 430 aaKnown RBP7.01□□□□□ -1.29
COPA-203ENST00000481040 C6orf222P0C671 652 aaPredicted RBP7.01□□□□□ -1.29
COPA-203ENST00000481040 ATF3P18847 181 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 NEK4P51957 841 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 ERVK-24P63145 666 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 STAT4Q14765 748 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 HP1BP3Q5SSJ5 553 aaPredicted RBP7.01□□□□□ -1.29
COPA-203ENST00000481040 ZBTB37Q5TC79 503 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 BRAPQ7Z569 592 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 HID1Q8IV36 788 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 MRPL41Q8IXM3 137 aaKnown RBP7.01□□□□□ -1.29
COPA-203ENST00000481040 FAM9AQ8IZU1 332 aaPredicted RBP7.01□□□□□ -1.29
COPA-203ENST00000481040 MTMR8Q96EF0 704 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 KLHDC7BQ96G42 594 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 CCDC74BQ96LY2 380 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 WDR18Q9BV38 432 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 CARD10Q9BWT7 1032 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 USP26Q9BXU7 913 aa7.01□□□□□ -1.29
COPA-203ENST00000481040 FANCGO15287 622 aa7□□□□□ -1.29
COPA-203ENST00000481040 BRINP1O60477 761 aa7□□□□□ -1.29
COPA-203ENST00000481040 AOC2O75106 756 aa7□□□□□ -1.29
COPA-203ENST00000481040 ASLP04424 464 aa7□□□□□ -1.29
COPA-203ENST00000481040 GBP1P32455 592 aa7□□□□□ -1.29
COPA-203ENST00000481040 GATA4P43694 442 aa7□□□□□ -1.29
COPA-203ENST00000481040 GRIK4Q16099 956 aa7□□□□□ -1.29
COPA-203ENST00000481040 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
COPA-203ENST00000481040 FGD2Q7Z6J4 655 aa7□□□□□ -1.29
COPA-203ENST00000481040 ADAT2Q7Z6V5 191 aaKnown RBP7□□□□□ -1.29
COPA-203ENST00000481040 CCDC144CPQ8IYA2 1237 aa7□□□□□ -1.29
COPA-203ENST00000481040 Q8N3U1 123 aa7□□□□□ -1.29
COPA-203ENST00000481040 BVESQ8NE79 360 aa7□□□□□ -1.29
COPA-203ENST00000481040 GSTCDQ8NEC7 633 aa7□□□□□ -1.29
COPA-203ENST00000481040 MTFR1LQ9H019 292 aa7□□□□□ -1.29
COPA-203ENST00000481040 GBP3Q9H0R5 595 aa7□□□□□ -1.29
COPA-203ENST00000481040 CCDC8Q9H0W5 538 aaPredicted RBP7□□□□□ -1.29
COPA-203ENST00000481040 SLC52A2Q9HAB3 445 aa7□□□□□ -1.29
COPA-203ENST00000481040 ARNT2Q9HBZ2 717 aa7□□□□□ -1.29
COPA-203ENST00000481040 TTBK1Q5TCY1 1321 aaPredicted RBP7□□□□□ -1.29
COPA-203ENST00000481040 NOP56O00567 594 aaKnown RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 TBX1O43435 398 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 OPA1O60313 960 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 EFCAB14O75071 495 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 GABREP78334 506 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 PIN1Q13526 163 aaPredicted RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 HDAC1Q13547 482 aaPredicted RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 HLTFQ14527 1009 aaKnown RBP eCLIP6.99□□□□□ -1.29
COPA-203ENST00000481040 ZNF460Q14592 562 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 SEPT7Q16181 437 aaKnown RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 DCAF15Q66K64 600 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 TMED8Q6PL24 325 aaPredicted RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 KLHL23Q8NBE8 558 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 TTC8Q8TAM2 541 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 BAHD1Q8TBE0 780 aaPredicted RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 ZNF507Q8TCN5 953 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 MRGPRX3Q96LB0 322 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 PUS7LQ9H0K6 701 aaKnown RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.99□□□□□ -1.29
COPA-203ENST00000481040 CDH19Q9H159 772 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 JPH1Q9HDC5 661 aaPredicted RBP6.99□□□□□ -1.29
COPA-203ENST00000481040 AASDHPPTQ9NRN7 309 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
COPA-203ENST00000481040 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms