RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PRC1O43663 620 aa23.16■■□□□ 1.3
LIME1-205ENST00000480139 BMP3P12645 472 aa23.16■■□□□ 1.3
LIME1-205ENST00000480139 PNMA1Q8ND90 353 aa23.16■■□□□ 1.3
LIME1-205ENST00000480139 IGDCC4Q8TDY8 1250 aa23.16■■□□□ 1.3
LIME1-205ENST00000480139 SPDYE16A6NNV3 312 aaPredicted RBP23.15■■□□□ 1.3
LIME1-205ENST00000480139 FLOT1O75955 427 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 SEC24BO95487 1268 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 SNHG28P0DPA3 235 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 SLC1A4P43007 532 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 LBX1P52954 281 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 FAM110CQ1W6H9 321 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 DHX32Q7L7V1 743 aaKnown RBP23.15■■□□□ 1.3
LIME1-205ENST00000480139 CHST3Q7LGC8 479 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 NUP88Q99567 741 aaPredicted RBP23.15■■□□□ 1.3
LIME1-205ENST00000480139 MORF4L1Q9UBU8 362 aa23.15■■□□□ 1.3
LIME1-205ENST00000480139 PLA2G6O60733 806 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 FKTNO75072 461 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 PDHBP11177 359 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 PSMA5P28066 241 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 DSG3P32926 999 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 ANAPC15P60006 121 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 EXOSC10Q01780 885 aaKnown RBP23.14■■□□□ 1.29
LIME1-205ENST00000480139 COL9A3Q14050 684 aaPredicted RBP23.14■■□□□ 1.29
LIME1-205ENST00000480139 WTAPQ15007 396 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 TMEM67Q5HYA8 995 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 ZNF296Q8WUU4 475 aaPredicted RBP23.14■■□□□ 1.29
LIME1-205ENST00000480139 PRDM10Q9NQV6 1147 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 CPA4Q9UI42 421 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 FEM1BQ9UK73 627 aa23.14■■□□□ 1.29
LIME1-205ENST00000480139 LIFRP42702 1097 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 SP3Q02447 781 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 TMTC2Q8N394 836 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 MB21D1Q8N884 522 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 JAKMIP1Q96N16 626 aaKnown RBP23.13■■□□□ 1.29
LIME1-205ENST00000480139 SLF1Q9BQI6 1058 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 TM6SF1Q9BZW5 370 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 LY9Q9HBG7 655 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 PPP1R9AQ9ULJ8 1098 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 ADAMTS5Q9UNA0 930 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 RABGAP1Q9Y3P9 1069 aa23.13■■□□□ 1.29
LIME1-205ENST00000480139 SH2B2O14492 632 aaPredicted RBP23.12■■□□□ 1.29
LIME1-205ENST00000480139 FBXO28Q9NVF7 368 aa23.12■■□□□ 1.29
LIME1-205ENST00000480139 COL11A1P12107 1806 aaPredicted RBP23.11■■□□□ 1.29
LIME1-205ENST00000480139 STAT2P52630 851 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 GPATCH4Q5T3I0 446 aaKnown RBP23.11■■□□□ 1.29
LIME1-205ENST00000480139 BLOC1S2Q6QNY1 142 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 POTEEQ6S8J3 1075 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 FAM160B2Q86V87 743 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 PRPF38AQ8NAV1 312 aaKnown RBP23.11■■□□□ 1.29
LIME1-205ENST00000480139 CHURC1Q8WUH1 139 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 ERO1AQ96HE7 468 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 RBPJLQ9UBG7 517 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 MGAMO43451 1857 aa23.11■■□□□ 1.29
LIME1-205ENST00000480139 CASP8AP2Q9UKL3 1982 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 TMEM232C9JQI7 657 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
LIME1-205ENST00000480139 ZNF543Q08ER8 600 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 BTNL9Q6UXG8 535 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 RASGRP2Q7LDG7 609 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 SGMS1Q86VZ5 419 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 FBXL16Q8N461 479 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 ATG4CQ96DT6 458 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 TXNRD2Q9NNW7 524 aa23.1■■□□□ 1.29
LIME1-205ENST00000480139 CNMDO75829 334 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 FDX1P10109 184 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 CASTP20810 708 aaKnown RBP23.09■■□□□ 1.29
LIME1-205ENST00000480139 RPS6KB1P23443 525 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 ERVK-9P63128 1117 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 ERVK-24P63145 666 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 CCDC96Q2M329 555 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 ASPRV1Q53RT3 343 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 KCTD1Q719H9 257 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 GPRC5AQ8NFJ5 357 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 SENP2Q9HC62 589 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 ZSWIM6Q9HCJ5 1215 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 MTMR7Q9Y216 660 aa23.09■■□□□ 1.29
LIME1-205ENST00000480139 VWA5AO00534 786 aa23.08■■□□□ 1.29
LIME1-205ENST00000480139 TROAPQ12815 778 aa23.08■■□□□ 1.29
LIME1-205ENST00000480139 CATIPQ7Z7H3 387 aa23.08■■□□□ 1.29
LIME1-205ENST00000480139 MAP3K14Q99558 947 aa23.08■■□□□ 1.29
LIME1-205ENST00000480139 GPHNQ9NQX3 736 aaPredicted RBP23.08■■□□□ 1.29
LIME1-205ENST00000480139 BTBD7Q9P203 1132 aa23.08■■□□□ 1.29
LIME1-205ENST00000480139 DDAH1O94760 285 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 KIF22Q14807 665 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 RUFY3Q7L099 469 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 REPS2Q8NFH8 660 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 PAGR1Q9BTK6 254 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 LRRC2Q9BYS8 371 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 AGXT2Q9BYV1 514 aa23.07■■□□□ 1.28
LIME1-205ENST00000480139 ISY1Q9ULR0 285 aaKnown RBP23.07■■□□□ 1.28
LIME1-205ENST00000480139 ZSWIM8A7E2V4 1837 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 CCDC69A6NI79 296 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 ATP2A1O14983 1001 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 GNRH1P01148 92 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 PARP1P09874 1014 aaKnown RBP23.06■■□□□ 1.28
LIME1-205ENST00000480139 CCNA1P78396 465 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 ARHGEF6Q15052 776 aa23.06■■□□□ 1.28
LIME1-205ENST00000480139 ZNF654Q8IZM8 581 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms