RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
ATG4B-219ENST00000479941 GNRH1P01148 92 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 MCCP23508 829 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 MCM5P33992 734 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 IFIT1BQ5T764 474 aaKnown RBP12.71□□□□□ -0.37
ATG4B-219ENST00000479941 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.37
ATG4B-219ENST00000479941 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 PRPF38AQ8NAV1 312 aaKnown RBP12.71□□□□□ -0.37
ATG4B-219ENST00000479941 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 KCNB2Q92953 911 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-219ENST00000479941 SLF1Q9BQI6 1058 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 FEM1BQ9UK73 627 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 PPP1R9AQ9ULJ8 1098 aa12.71□□□□□ -0.37
ATG4B-219ENST00000479941 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
ATG4B-219ENST00000479941 PLA2G6O60733 806 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
ATG4B-219ENST00000479941 STAT2P52630 851 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 FCGRTP55899 365 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 ERVK-24P63145 666 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 CCNA1P78396 465 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 SEC23AQ15436 765 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 TXNRD2Q9NNW7 524 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 ADAMTS5Q9UNA0 930 aa12.7□□□□□ -0.38
ATG4B-219ENST00000479941 TMEM232C9JQI7 657 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 PRC1O43663 620 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 CNMDO75829 334 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 FMNL1O95466 1100 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-219ENST00000479941 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 FDX1P10109 184 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 PDHBP11177 359 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 HOXD10P28358 340 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 PSMC4P43686 418 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 ANTXR2P58335 489 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 WTAPQ15007 396 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 PKN2Q16513 984 aaKnown RBP12.69□□□□□ -0.38
ATG4B-219ENST00000479941 Q3C1V9 767 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-219ENST00000479941 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 CHST3Q7LGC8 479 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 FAM160B2Q86V87 743 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 IGDCC4Q8TDY8 1250 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
ATG4B-219ENST00000479941 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 TRIM17Q9Y577 477 aa12.69□□□□□ -0.38
ATG4B-219ENST00000479941 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 VWA5AO00534 786 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 ZBED4O75132 1171 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 PSMA5P28066 241 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 MAPK4P31152 587 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 PRMT2P55345 433 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 IKQ13123 557 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 ADCK5Q3MIX3 580 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 KCTD1Q719H9 257 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 OTOP1Q7RTM1 612 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 CCAR1Q8IX12 1150 aaKnown RBP12.68□□□□□ -0.38
ATG4B-219ENST00000479941 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 ARHGAP39Q9C0H5 1083 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 RLFQ13129 1914 aa12.68□□□□□ -0.38
ATG4B-219ENST00000479941 HTTP42858 3142 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-219ENST00000479941 PEX10O60683 326 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 CTGFP29279 349 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 LIFRP42702 1097 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 CAP1Q01518 475 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 EXOSC10Q01780 885 aaKnown RBP12.67□□□□□ -0.38
ATG4B-219ENST00000479941 ZNF543Q08ER8 600 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 BTNL9Q6UXG8 535 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 COA7Q96BR5 231 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 CHMP4CQ96CF2 233 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 SPATC1LQ9H0A9 340 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 SLC38A10Q9HBR0 1119 aa12.67□□□□□ -0.38
ATG4B-219ENST00000479941 CTDP1Q9Y5B0 961 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-219ENST00000479941 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 ATP2A1O14983 1001 aa12.66□□□□□ -0.38
ATG4B-219ENST00000479941 ECM2O94769 699 aaPredicted RBP12.66□□□□□ -0.38
ATG4B-219ENST00000479941 PARP1P09874 1014 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms