RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CALM3P0DP25 149 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 KRT222Q8N1A0 295 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 PNMA1Q8ND90 353 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
VPS52-217ENST00000478934 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 KAT14Q9H8E8 782 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 LZTFL1Q9NQ48 299 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 SYNRGQ9UMZ2 1314 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 IRS2Q9Y4H2 1338 aa12.27□□□□□ -0.45
VPS52-217ENST00000478934 ABL1P00519 1130 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 KCNJ6P48051 423 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 C12orf60Q5U649 245 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 SPATA1Q5VX52 437 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 PDXDC2PQ6P474 469 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 MNS1Q8NEH6 495 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 FERMT2Q96AC1 680 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
VPS52-217ENST00000478934 STX8Q9UNK0 236 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 SCN7AQ01118 1682 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 LAMB2P55268 1798 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 SEMA3EO15041 775 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 ARHGAP6O43182 974 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
VPS52-217ENST00000478934 RAD9BQ6WBX8 426 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 C4orf32Q8N8J7 132 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 IGSF22Q8N9C0 903 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 TRIML1Q8N9V2 468 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 LRRC15Q8TF66 581 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 UBXN4Q92575 508 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 VPS16Q9H269 839 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 MKNK2Q9HBH9 465 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
VPS52-217ENST00000478934 DACH1Q9UI36 760 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 MAD2L2Q9UI95 211 aa12.26□□□□□ -0.45
VPS52-217ENST00000478934 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
VPS52-217ENST00000478934 COL5A3P25940 1745 aaPredicted RBP12.26□□□□□ -0.45
VPS52-217ENST00000478934 ERICH4A6NGS2 130 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
VPS52-217ENST00000478934 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
VPS52-217ENST00000478934 INF2Q27J81 1249 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 ADD3Q9UEY8 706 aaKnown RBP12.25□□□□□ -0.45
VPS52-217ENST00000478934 TRIM49BA6NDI0 452 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 CASP14P31944 242 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 FXR1P51114 621 aaKnown RBP eCLIP12.25□□□□□ -0.45
VPS52-217ENST00000478934 SBK1Q52WX2 424 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 CDKAL1Q5VV42 579 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 WWC2Q6AWC2 1192 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 HEATR3Q7Z4Q2 680 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 CASZ1Q86V15 1759 aa12.25□□□□□ -0.45
VPS52-217ENST00000478934 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 VAT1LQ9HCJ6 419 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 TAB2Q9NYJ8 693 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 FHOD1Q9Y613 1164 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 PHLPP2Q6ZVD8 1323 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 AKR1B15C9JRZ8 316 aaPredicted RBP12.24□□□□□ -0.45
VPS52-217ENST00000478934 TSPY3P0CV98 308 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 TSPY8P0CW00 308 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 CASQ1P31415 396 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 STX10O60499 249 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 RFC4P35249 363 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
VPS52-217ENST00000478934 GPSM2P81274 684 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 KRT31Q15323 416 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 FAM196AQ6ZSG2 479 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 IQUBQ8NA54 791 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
VPS52-217ENST00000478934 POLR3GO15318 223 aaPredicted RBP12.23□□□□□ -0.45
VPS52-217ENST00000478934 ZSCAN12O43309 604 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 MYO1BO43795 1136 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 TADA3O75528 432 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 GYPCP04921 128 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
VPS52-217ENST00000478934 PBX1P40424 430 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 TERF2Q15554 542 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 NAALADL2Q58DX5 795 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 PNMA6AP0CW24 399 aaPredicted RBP12.23□□□□□ -0.45
VPS52-217ENST00000478934 PRCPP42785 496 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 ACRBPQ8NEB7 543 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
VPS52-217ENST00000478934 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 CCDC34Q96HJ3 373 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
VPS52-217ENST00000478934 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
VPS52-217ENST00000478934 SLURP2P0DP57 97 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 RASA1P20936 1047 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 KIF5BP33176 963 aa12.22□□□□□ -0.45
VPS52-217ENST00000478934 PPFIBP1Q86W92 1011 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms