RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 HOXC9P31274 260 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 KRT9P35527 623 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 PRPHP41219 470 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 STX17P56962 302 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 PTGISQ16647 500 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 RNF187Q5TA31 235 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 CCDC70Q6NSX1 233 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 SRRM3A6NNA2 597 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 ZNF185O15231 689 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 PDHBP11177 359 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 RANBP1P43487 201 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 EPHB4P54760 987 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 HERVK_113P62684 666 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 E2F5Q15329 346 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 CYB5D1Q6P9G0 228 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 EMBQ6PCB8 327 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 EHBP1Q8NDI1 1231 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 CAGE1Q8TC20 777 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 RNPC3Q96LT9 517 aaKnown RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 ACTR5Q9H9F9 607 aaPredicted RBP11.8□□□□□ -0.52
ABCF1-205ENST00000475993 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
ABCF1-205ENST00000475993 HSF2BPO75031 334 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 PPP1R37O75864 691 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 EZRP15311 586 aaKnown RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 ITIH3Q06033 890 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 NNTQ13423 1086 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 KRT31Q15323 416 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 RINLQ6ZS11 566 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 ZNF572Q7Z3I7 529 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 MYLK4Q86YV6 388 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 FUKQ8N0W3 1084 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 HDAC7Q8WUI4 952 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 LMBR1Q8WVP7 490 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 CCT8L2Q96SF2 557 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 RUFY1Q96T51 708 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 MAF1Q9H063 256 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 RMI1Q9H9A7 625 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 LIMA1Q9UHB6 759 aaKnown RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 DMGDHQ9UI17 866 aaKnown RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 CPDO75976 1380 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 BCL9LQ86UU0 1499 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 BTBD11A6QL63 1104 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 PYGBP11216 843 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 IFT88Q13099 833 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 CCDC181Q5TID7 509 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 KIAA1328Q86T90 577 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 TMTC2Q8N394 836 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 TMX4Q9H1E5 349 aaPredicted RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
ABCF1-205ENST00000475993 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
ABCF1-205ENST00000475993 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 FOXP2O15409 715 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 CDKL5O76039 1030 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 FAM107AO95990 144 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 MAGEA8P43361 318 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 SLC8A3P57103 927 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 GUCY1A3Q02108 690 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 NLRP14Q86W24 1093 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 ECM29Q5VYK3 1845 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 GOLGA6L7A0A1B0GV03 622 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 M0R2C6 588 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 N4BP3O15049 544 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 RNF113AO15541 343 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 DDX58O95786 925 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 TNFRSF8P28908 595 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 CDCA2Q69YH5 1023 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 ZIM3Q96PE6 472 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 LRRC1Q9BTT6 524 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 TPX2Q9ULW0 747 aaKnown RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 ROBO2Q9HCK4 1378 aa11.78□□□□□ -0.52
ABCF1-205ENST00000475993 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.78□□□□□ -0.52
ABCF1-205ENST00000475993 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.52
ABCF1-205ENST00000475993 OATP04181 439 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 SLC8A1P32418 973 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.52
ABCF1-205ENST00000475993 HAND2P61296 217 aa11.77□□□□□ -0.52
ABCF1-205ENST00000475993 IMMTQ16891 758 aaKnown RBP11.77□□□□□ -0.52
ABCF1-205ENST00000475993 NCAPG2Q86XI2 1143 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms