RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 FAM155AB1AL88 458 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-224ENST00000475524 DHX16O60231 1041 aaKnown RBP17.67■□□□□ 0.42
MCF2L-224ENST00000475524 BMP3P12645 472 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 VCAM1P19320 739 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 METAP2P50579 478 aaKnown RBP eCLIP17.67■□□□□ 0.42
MCF2L-224ENST00000475524 NOGQ13253 232 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
MCF2L-224ENST00000475524 MICU3Q86XE3 530 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-224ENST00000475524 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
MCF2L-224ENST00000475524 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-224ENST00000475524 C1QTNF8P60827 252 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 MOGSQ13724 837 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 ME3Q16798 604 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 RTN1Q16799 776 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 BTNL9Q6UXG8 535 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 FAM160B2Q86V87 743 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 RLFQ13129 1914 aa17.66■□□□□ 0.42
MCF2L-224ENST00000475524 A0A0G2JMZ2 1700 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L15C9J2P7 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L13C9JLJ4 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L11C9JVI0 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L18D6R9N7 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L22D6RA61 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L17D6RBQ6 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L19D6RCP7 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L20D6RJB6 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-224ENST00000475524 CD2BP2O95400 341 aaKnown RBP17.65■□□□□ 0.42
MCF2L-224ENST00000475524 FDX1P10109 184 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 HSPA6P17066 643 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 USP17L24Q0WX57 530 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 SREBF2Q12772 1141 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 ZYXQ15942 572 aaKnown RBP17.65■□□□□ 0.42
MCF2L-224ENST00000475524 CCDC96Q2M329 555 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 KIAA1755Q5JYT7 1200 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
MCF2L-224ENST00000475524 ANKRD23Q86SG2 305 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 HSCBQ8IWL3 235 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 CHURC1Q8WUH1 139 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 FEM1BQ9UK73 627 aa17.65■□□□□ 0.42
MCF2L-224ENST00000475524 CCL15-CCL14A0A0B4J2E2 113 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 STAT2P52630 851 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 CCL15Q16663 113 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 TMTC3Q6ZXV5 915 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 TMX3Q96JJ7 454 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 MYL10Q9BUA6 226 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 SPZ1Q9BXG8 430 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
MCF2L-224ENST00000475524 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
MCF2L-224ENST00000475524 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
MCF2L-224ENST00000475524 KLRF2D3W0D1 207 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 CDKL5O76039 1030 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 BECN1Q14457 450 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 FAM83BQ5T0W9 1011 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 GADL1Q6ZQY3 521 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 CATSPERGQ6ZRH7 1159 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 GTF3C2Q8WUA4 911 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-224ENST00000475524 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 LLPHQ9BRT6 129 aaKnown RBP17.63■□□□□ 0.41
MCF2L-224ENST00000475524 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-224ENST00000475524 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
MCF2L-224ENST00000475524 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-224ENST00000475524 MYH6P13533 1939 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 RAD21O60216 631 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 LARGE1O95461 756 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 IFNAR1P17181 557 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 MAP2K2P36507 400 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
MCF2L-224ENST00000475524 TM4SF4P48230 202 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 SCRN1Q12765 414 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 CUL4AQ13619 759 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 GPAT2Q6NUI2 795 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 PRPF38AQ8NAV1 312 aaKnown RBP17.62■□□□□ 0.41
MCF2L-224ENST00000475524 BRI3BPQ8WY22 251 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 RIOX1Q9H6W3 641 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 PNMA2Q9UL42 364 aa17.62■□□□□ 0.41
MCF2L-224ENST00000475524 TMEM232C9JQI7 657 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 CPLX1O14810 134 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 RXRAP19793 462 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 CDC27P30260 824 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 COG2Q14746 738 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 NTRK3Q16288 839 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 OTUD7BQ6GQQ9 843 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 CYP4F22Q6NT55 531 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 KCTD1Q719H9 257 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 NOL8Q76FK4 1167 aaKnown RBP17.61■□□□□ 0.41
MCF2L-224ENST00000475524 STAG2Q8N3U4 1231 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 INTS4Q96HW7 963 aaKnown RBP17.61■□□□□ 0.41
MCF2L-224ENST00000475524 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 LARP6Q9BRS8 491 aaKnown RBP17.61■□□□□ 0.41
MCF2L-224ENST00000475524 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
MCF2L-224ENST00000475524 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms