RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 MYOGP15173 224 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 TAL1P17542 331 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-203ENST00000467533 COG2Q14746 738 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 GORABQ5T7V8 394 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 NAA16Q6N069 864 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-203ENST00000467533 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 VTI1AQ96AJ9 217 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 AKAP2Q9Y2D5 859 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-203ENST00000467533 PARP14Q460N5 1801 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 PTPRCP08575 1304 aa12.59□□□□□ -0.39
HDAC3-203ENST00000467533 RFXAPO00287 272 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 CYP2C18P33260 490 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 KCNA10Q16322 511 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 CSPP1Q1MSJ5 1256 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 HLA-CQ95604 372 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 CDCA7LQ96GN5 454 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 MMP19Q99542 508 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 TINF2Q9BSI4 451 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
HDAC3-203ENST00000467533 MYO5AQ9Y4I1 1855 aaKnown RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 PRRC2BQ5JSZ5 2229 aaKnown RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 A0A0U1RQG5 324 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 ZBBXA8MT70 800 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 PGK2P07205 417 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 UBTFL1P0CB47 393 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 ZNF865P0CJ78 1059 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 CERKLQ49MI3 558 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 TATDN1Q6P1N9 297 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-203ENST00000467533 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 MB21D1Q8N884 522 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 CERS4Q9HA82 394 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 CNPY2Q9Y2B0 182 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 SLC4A7Q9Y6M7 1214 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 ELP1O95163 1332 aa12.57□□□□□ -0.4
HDAC3-203ENST00000467533 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 POU3F3P20264 500 aaPredicted RBP12.56□□□□□ -0.4
HDAC3-203ENST00000467533 CDK7P50613 346 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 TFCP2Q12800 502 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 KRT40Q6A162 431 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 MRPL50Q8N5N7 158 aaKnown RBP12.56□□□□□ -0.4
HDAC3-203ENST00000467533 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 CD320Q9NPF0 282 aa12.56□□□□□ -0.4
HDAC3-203ENST00000467533 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ARVCFO00192 962 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ASGR1P07306 291 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 CA3P07451 260 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-203ENST00000467533 MCAMP43121 646 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 PPP4CP60510 307 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 KCTD2Q14681 263 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 PCSK9Q8NBP7 692 aaKnown RBP12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ATG4CQ96DT6 458 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 COPRSQ9NQ92 184 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 ZHX1Q9UKY1 873 aaPredicted RBP12.55□□□□□ -0.4
HDAC3-203ENST00000467533 FAM184BQ9ULE4 1060 aa12.55□□□□□ -0.4
HDAC3-203ENST00000467533 FLOT1O75955 427 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 SLC25A27O95847 323 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
HDAC3-203ENST00000467533 DSG3P32926 999 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 USP5P45974 858 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 CCL23P55773 120 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 TMEM67Q5HYA8 995 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
HDAC3-203ENST00000467533 ARNTL2Q8WYA1 636 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 FBXL18Q96ME1 805 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 EHD4Q9H223 541 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 SPC25Q9HBM1 224 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
HDAC3-203ENST00000467533 MYH8P13535 1937 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 SSTR3P32745 418 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 SEPT2Q15019 361 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 ZNF792Q3KQV3 632 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 KCNH6Q9H252 994 aa12.53□□□□□ -0.4
HDAC3-203ENST00000467533 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
HDAC3-203ENST00000467533 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 DUSP11O75319 330 aaKnown RBP12.52□□□□□ -0.41
HDAC3-203ENST00000467533 CD4P01730 458 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 ALADP13716 330 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 TMEM132BQ14DG7 1078 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
HDAC3-203ENST00000467533 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms