RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SMARCC1Q92922 1105 aaPredicted RBP6.26□□□□□ -1.41
SMC4-208ENST00000467468 VWCEQ96DN2 955 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 SLC6A18Q96N87 628 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 SLC9A7Q96T83 725 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 LNPKQ9C0E8 428 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 STRIP2Q9ULQ0 834 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
SMC4-208ENST00000467468 PAPLNO95428 1278 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 FGRP09769 529 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 GUCY2CP25092 1073 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 GDNFP39905 211 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 RBL2Q08999 1139 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 BBS9Q3SYG4 887 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 NOP9Q86U38 636 aaKnown RBP6.25□□□□□ -1.41
SMC4-208ENST00000467468 MCF2L2Q86YR7 1114 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 CPLX3Q8WVH0 158 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 SEC16BQ96JE7 1060 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 SRRTQ9BXP5 876 aaKnown RBP6.25□□□□□ -1.41
SMC4-208ENST00000467468 SUCOQ9UBS9 1254 aaKnown RBP6.25□□□□□ -1.41
SMC4-208ENST00000467468 TMEM59LQ9UK28 342 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 CTNND2Q9UQB3 1225 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 SLC12A7Q9Y666 1083 aa6.25□□□□□ -1.41
SMC4-208ENST00000467468 SSU72P8A0A1W2PR75 194 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 TXKP42681 527 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
SMC4-208ENST00000467468 CCDC144CPQ8IYA2 1237 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 ZNF655Q8N720 491 aaPredicted RBP6.24□□□□□ -1.41
SMC4-208ENST00000467468 DAGLBQ8NCG7 672 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
SMC4-208ENST00000467468 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 FAM86C2PA6NEL3 165 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 SIGLEC6O43699 453 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
SMC4-208ENST00000467468 NASPP49321 788 aaPredicted RBP6.23□□□□□ -1.41
SMC4-208ENST00000467468 PMS1P54277 932 aaKnown RBP6.23□□□□□ -1.41
SMC4-208ENST00000467468 DUSP4Q13115 394 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 SOGA3Q5TF21 947 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 GIMAP6Q6P9H5 292 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 TTC6Q86TZ1 520 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 ZSWIM9Q86XI8 627 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 TMEM192Q8IY95 271 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 FAM168AQ92567 244 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 ZNF512BQ96KM6 892 aaPredicted RBP6.23□□□□□ -1.41
SMC4-208ENST00000467468 HIRIP3Q9BW71 556 aaPredicted RBP6.23□□□□□ -1.41
SMC4-208ENST00000467468 HDAC8Q9BY41 377 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 PRR13Q9NZ81 148 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 FBXL21Q9UKT6 434 aa6.23□□□□□ -1.41
SMC4-208ENST00000467468 ACRP10323 421 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 ENDOUP21128 410 aaKnown RBP6.22□□□□□ -1.41
SMC4-208ENST00000467468 PCBP3P57721 371 aaKnown RBP6.22□□□□□ -1.41
SMC4-208ENST00000467468 KCNMB1Q16558 191 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 TMC3Q7Z5M5 1100 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 OXR1Q8N573 874 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 C19orf47Q8N9M1 422 aaKnown RBP6.22□□□□□ -1.41
SMC4-208ENST00000467468 KIRREL1Q96J84 757 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 CHST7Q9NS84 486 aa6.22□□□□□ -1.41
SMC4-208ENST00000467468 WASH4PA8MWX3 477 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
SMC4-208ENST00000467468 GIPRP48546 466 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 AUHQ13825 339 aaKnown RBP6.21□□□□□ -1.42
SMC4-208ENST00000467468 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 UNC5AQ6ZN44 842 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 C7orf61Q8IZ16 206 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 TCTN2Q96GX1 697 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 FMNL2Q96PY5 1086 aa6.21□□□□□ -1.42
SMC4-208ENST00000467468 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.21□□□□□ -1.422e-9■■■■■ 123.9
SMC4-208ENST00000467468 PHAXQ9H814 394 aaKnown RBP6.21□□□□□ -1.42
SMC4-208ENST00000467468 DNAJC25-GNG10A0A024R161 153 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 PRAMEF1O95521 474 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 HK2P52789 917 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 TEKQ02763 1124 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 CHRNEQ04844 493 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 RALGPS1Q5JS13 557 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 RUFY4Q6ZNE9 571 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 PDZD8Q8NEN9 1154 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 DSCC1Q9BVC3 393 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 FAM53CQ9NYF3 392 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 TCFL5Q9UL49 500 aa6.2□□□□□ -1.42
SMC4-208ENST00000467468 FITM1A5D6W6 292 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 SNW1Q13573 536 aaKnown RBP6.19□□□□□ -1.42
SMC4-208ENST00000467468 TMEM67Q5HYA8 995 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 TDRD10Q5VZ19 366 aaKnown RBP6.19□□□□□ -1.42
SMC4-208ENST00000467468 SPPL2CQ8IUH8 684 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 LILRA2Q8N149 483 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 ANKS4BQ8N8V4 417 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 LINC00116Q8NCU8 138 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 ABHD4Q8TB40 342 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 PMFBP1Q8TBY8 1022 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 SHDQ96IW2 340 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 ADAMTS10Q9H324 1103 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 C19orf73Q9NVV2 129 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 GFOD1Q9NXC2 390 aa6.19□□□□□ -1.42
SMC4-208ENST00000467468 TMA7Q9Y2S6 64 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms