RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 PARP14Q460N5 1801 aa23.1■■□□□ 1.29
GMDS-203ENST00000467288 CCDC171Q6TFL3 1326 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 SLC15A5A6NIM6 579 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 SGPL1O95470 568 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 FGAP02671 866 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 TSPY3P0CV98 308 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 TSPY8P0CW00 308 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 HSPD1P10809 573 aaKnown RBP23.09■■□□□ 1.29
GMDS-203ENST00000467288 TFAP4Q01664 338 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 CTDSPL2Q05D32 466 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 MAP2K5Q13163 448 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 FAM83BQ5T0W9 1011 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 TRMT44Q8IYL2 757 aaKnown RBP23.09■■□□□ 1.29
GMDS-203ENST00000467288 SHCBP1Q8NEM2 672 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 CWC22Q9HCG8 908 aaKnown RBP23.09■■□□□ 1.29
GMDS-203ENST00000467288 FBXO28Q9NVF7 368 aa23.09■■□□□ 1.29
GMDS-203ENST00000467288 ZMYM6O95789 1325 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 NDUFB10O96000 172 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 FGRP09769 529 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 TRIM32Q13049 653 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 FAM47AQ5JRC9 791 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 WDR78Q5VTH9 848 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 CHRDL2Q6WN34 429 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 APBA2Q99767 749 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 PPP1R9AQ9ULJ8 1098 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 TACC3Q9Y6A5 838 aa23.08■■□□□ 1.29
GMDS-203ENST00000467288 TTLL1O95922 423 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 CAPN2P17655 700 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 GRB14Q14449 540 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 MAP3K21Q5TCX8 1036 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 HTATIP2Q9BUP3 242 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.07■■□□□ 1.28
GMDS-203ENST00000467288 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 IVNS1ABPQ9Y6Y0 642 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 RPTORQ8N122 1335 aa23.07■■□□□ 1.28
GMDS-203ENST00000467288 ORC4O43929 436 aa23.06■■□□□ 1.28
GMDS-203ENST00000467288 RAD21O60216 631 aa23.06■■□□□ 1.28
GMDS-203ENST00000467288 HOXC6P09630 235 aa23.06■■□□□ 1.28
GMDS-203ENST00000467288 ZKSCAN1P17029 563 aaPredicted RBP23.06■■□□□ 1.28
GMDS-203ENST00000467288 DEFB118Q96PH6 123 aa23.06■■□□□ 1.28
GMDS-203ENST00000467288 NUP88Q99567 741 aaPredicted RBP23.06■■□□□ 1.28
GMDS-203ENST00000467288 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
GMDS-203ENST00000467288 HIP1O00291 1037 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
GMDS-203ENST00000467288 TFRCP02786 760 aaKnown RBP23.05■■□□□ 1.28
GMDS-203ENST00000467288 ERCC3P19447 782 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 MFAP1P55081 439 aaKnown RBP23.05■■□□□ 1.28
GMDS-203ENST00000467288 TMEM132BQ14DG7 1078 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 CCL14Q16627 93 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 SAMD1Q6SPF0 538 aaPredicted RBP23.05■■□□□ 1.28
GMDS-203ENST00000467288 GMCL1P1Q8NEA9 526 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 CRISPLD2Q9H0B8 497 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 MROH8Q9H579 483 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 HMX1Q9NP08 348 aaPredicted RBP23.05■■□□□ 1.28
GMDS-203ENST00000467288 MYH4Q9Y623 1939 aa23.05■■□□□ 1.28
GMDS-203ENST00000467288 TSPY2A6NKD2 308 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 VWA5AO00534 786 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 STRNO43815 780 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 PPP4R3BQ5MIZ7 849 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 LRRC47Q8N1G4 583 aaKnown RBP23.04■■□□□ 1.28
GMDS-203ENST00000467288 REPS2Q8NFH8 660 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 DIAPH3Q9NSV4 1193 aa23.04■■□□□ 1.28
GMDS-203ENST00000467288 RBM27Q9P2N5 1060 aaKnown RBP23.04■■□□□ 1.28
GMDS-203ENST00000467288 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 PLS1Q14651 629 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 TTC22Q5TAA0 569 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 CWC27Q6UX04 472 aaKnown RBP23.03■■□□□ 1.28
GMDS-203ENST00000467288 NPLOC4Q8TAT6 608 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 SLF1Q9BQI6 1058 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 IL17RBQ9NRM6 502 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 NR2E3Q9Y5X4 410 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 ZNF236Q9UL36 1845 aa23.03■■□□□ 1.28
GMDS-203ENST00000467288 SLC25A27O95847 323 aa23.02■■□□□ 1.28
GMDS-203ENST00000467288 PRKAR2AP13861 404 aaKnown RBP23.02■■□□□ 1.28
GMDS-203ENST00000467288 GSPT1P15170 499 aaKnown RBP23.02■■□□□ 1.28
GMDS-203ENST00000467288 NOVP48745 357 aa23.02■■□□□ 1.28
GMDS-203ENST00000467288 CACNB2Q08289 660 aaPredicted RBP23.02■■□□□ 1.28
GMDS-203ENST00000467288 NCAPG2Q86XI2 1143 aa23.02■■□□□ 1.28
GMDS-203ENST00000467288 RIOX2Q8IUF8 465 aa23.02■■□□□ 1.28
GMDS-203ENST00000467288 ZNF214Q9UL59 606 aaPredicted RBP23.02■■□□□ 1.28
GMDS-203ENST00000467288 COL11A1P12107 1806 aaPredicted RBP23.01■■□□□ 1.27
GMDS-203ENST00000467288 RANBP6O60518 1105 aaKnown RBP23.01■■□□□ 1.27
GMDS-203ENST00000467288 IGHA2P01877 340 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 ADORA2AP29274 412 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 STAT3P40763 770 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 SLFN13Q68D06 897 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 ABRAQ8N0Z2 381 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 PRPF38AQ8NAV1 312 aaKnown RBP23.01■■□□□ 1.27
GMDS-203ENST00000467288 FLRT1Q9NZU1 646 aa23.01■■□□□ 1.27
GMDS-203ENST00000467288 HAND2P61296 217 aa23■■□□□ 1.27
GMDS-203ENST00000467288 NBPF3Q9H094 633 aa23■■□□□ 1.27
GMDS-203ENST00000467288 STX8Q9UNK0 236 aa23■■□□□ 1.27
GMDS-203ENST00000467288 SZT2Q5T011 3432 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 NMT2O60551 498 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 PCP11498 1178 aaKnown RBP22.99■■□□□ 1.27
GMDS-203ENST00000467288 BMP3P12645 472 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 COPB2P35606 906 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 AKNAD1Q5T1N1 836 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 MFSD14CQ5VZR4 134 aa22.99■■□□□ 1.27
GMDS-203ENST00000467288 DPP9Q86TI2 863 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms