RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TRANK1O15050 2925 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 A0A1W2PQ45 241 aaPredicted RBP14.78□□□□□ -0.04
UBR4-211ENST00000467272 A0A1W2PQY0 241 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
UBR4-211ENST00000467272 FLOT1O75955 427 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 SLC25A27O95847 323 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 CLTBP09497 229 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 FCER1AP12319 257 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 TTF1Q15361 905 aaPredicted RBP14.78□□□□□ -0.04
UBR4-211ENST00000467272 RASIP1Q5U651 963 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 AACSQ86V21 672 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 RIOX2Q8IUF8 465 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 DYNLL2Q96FJ2 89 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 XPNPEP3Q9NQH7 507 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
UBR4-211ENST00000467272 REV3LO60673 3130 aa14.77□□□□□ -0.04
UBR4-211ENST00000467272 ZBED9Q6R2W3 1325 aa14.77□□□□□ -0.04
UBR4-211ENST00000467272 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 C12orf60Q5U649 245 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 NCAPG2Q86XI2 1143 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 SPICE1Q8N0Z3 855 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 KLHDC9Q8NEP7 349 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 TSEN34Q9BSV6 310 aaKnown RBP14.77□□□□□ -0.05
UBR4-211ENST00000467272 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.77□□□□□ -0.05
UBR4-211ENST00000467272 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.05
UBR4-211ENST00000467272 VWA5AO00534 786 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
UBR4-211ENST00000467272 PRKAB2O43741 272 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 PGK1P00558 417 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 PGK2P07205 417 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 RARBP10826 455 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 FOSL2P15408 326 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 ICA1Q05084 483 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 GRIN2CQ14957 1233 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBR4-211ENST00000467272 C16orf59Q7L2K0 433 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 FBXO28Q9NVF7 368 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 TBX21Q9UL17 535 aa14.76□□□□□ -0.05
UBR4-211ENST00000467272 NCOR1O75376 2440 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 DNAJC25-GNG10A0A024R161 153 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 CDK8P49336 464 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 CDK7P50613 346 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 MAMDC4Q6UXC1 1216 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 C16orf86Q6ZW13 317 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 RNF180Q86T96 592 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 MSL3Q8N5Y2 521 aaKnown RBP14.75□□□□□ -0.05
UBR4-211ENST00000467272 RNPC3Q96LT9 517 aaKnown RBP14.75□□□□□ -0.05
UBR4-211ENST00000467272 ARHGEF10LQ9HCE6 1279 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 PPP1R9AQ9ULJ8 1098 aa14.75□□□□□ -0.05
UBR4-211ENST00000467272 SNAI1O95863 264 aaPredicted RBP14.74□□□□□ -0.05
UBR4-211ENST00000467272 EEF2P13639 858 aaKnown RBP14.74□□□□□ -0.05
UBR4-211ENST00000467272 AKR1A1P14550 325 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 CST5P28325 142 aaPredicted RBP14.74□□□□□ -0.05
UBR4-211ENST00000467272 ADD2P35612 726 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 STAT3P40763 770 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 ACLYP53396 1101 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 FPGSQ05932 587 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 PLS1Q14651 629 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 SLFNL1Q499Z3 407 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 ITPRIPQ8IWB1 547 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 LENG1Q96BZ8 264 aaPredicted RBP14.74□□□□□ -0.05
UBR4-211ENST00000467272 MMP19Q99542 508 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 SH2D4AQ9H788 454 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 ARMT1Q9H993 441 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 SMCHD1A6NHR9 2005 aa14.74□□□□□ -0.05
UBR4-211ENST00000467272 SYNGAP1Q96PV0 1343 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 SYNRGQ9UMZ2 1314 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 CYP2D7A0A087X1C5 515 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.73□□□□□ -0.05
UBR4-211ENST00000467272 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.73□□□□□ -0.05
UBR4-211ENST00000467272 GOLIM4O00461 696 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 DNAJB2P25686 324 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 NKX3-2P78367 333 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 SIRT2Q8IXJ6 389 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 FGD4Q96M96 766 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 KANSL2Q9H9L4 492 aa14.73□□□□□ -0.05
UBR4-211ENST00000467272 MOXD2PA6NHM9 499 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 ATP2A1O14983 1001 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 CTAGE5O15320 804 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 ADCY6O43306 1168 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 PQBP1O60828 265 aaKnown RBP14.72□□□□□ -0.05
UBR4-211ENST00000467272 MBD4O95243 580 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 TIMP1P01033 207 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 CHGBP05060 677 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 RAG1P15918 1043 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 COPB2P35606 906 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 KCTD2Q14681 263 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
UBR4-211ENST00000467272 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.72□□□□□ -0.052e-9■■□□□ 13.7
UBR4-211ENST00000467272 UPF3AQ9H1J1 476 aaKnown RBP14.72□□□□□ -0.05
UBR4-211ENST00000467272 TMEM39AQ9NV64 488 aa14.72□□□□□ -0.05
UBR4-211ENST00000467272 RIPK3Q9Y572 518 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms