RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 SMIM22K7EJ46 135 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 APBB1O00213 710 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
ABCF3-205ENST00000466416 GTPBP6O43824 516 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-205ENST00000466416 SLC25A27O95847 323 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 ZNF865P0CJ78 1059 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-205ENST00000466416 DSG3P32926 999 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 MCAMP43121 646 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 MRE11P49959 708 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 PLS1Q14651 629 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 CCDC184Q52MB2 194 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 CCSAPQ6IQ19 270 aaPredicted RBP11.29□□□□□ -0.6
ABCF3-205ENST00000466416 TTC6Q86TZ1 520 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 PCSK9Q8NBP7 692 aaKnown RBP11.29□□□□□ -0.6
ABCF3-205ENST00000466416 TANGO6Q9C0B7 1094 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 CNPY2Q9Y2B0 182 aa11.29□□□□□ -0.6
ABCF3-205ENST00000466416 PRR33A8MZF0 331 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 ARVCFO00192 962 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
ABCF3-205ENST00000466416 CERS3Q8IU89 383 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
ABCF3-205ENST00000466416 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 MMP19Q99542 508 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 FAM184BQ9ULE4 1060 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
ABCF3-205ENST00000466416 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-205ENST00000466416 FAM86C2PA6NEL3 165 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.61
ABCF3-205ENST00000466416 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.61
ABCF3-205ENST00000466416 KCTD2Q14681 263 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 ZNF792Q3KQV3 632 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 HLA-CQ95604 372 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 SLC4A7Q9Y6M7 1214 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.61
ABCF3-205ENST00000466416 PRRC2BQ5JSZ5 2229 aaKnown RBP11.26□□□□□ -0.61
ABCF3-205ENST00000466416 CYP2C18P33260 490 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 GUCY1A2P33402 732 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 USP5P45974 858 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 SEPT2Q15019 361 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 OTOP2Q7RTS6 562 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 FAM126BQ8IXS8 530 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
ABCF3-205ENST00000466416 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 KHSRPQ92945 711 aaKnown RBP eCLIP11.26□□□□□ -0.61
ABCF3-205ENST00000466416 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-205ENST00000466416 KCNH6Q9H252 994 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
ABCF3-205ENST00000466416 A0A1W2PRG0 241 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 FLOT1O75955 427 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 CD4P01730 458 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 PGK2P07205 417 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 ASGR1P07306 291 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 SHMT1P34896 483 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 RABGGTBP53611 331 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 DYNLL1P63167 89 aaKnown RBP11.25□□□□□ -0.61
ABCF3-205ENST00000466416 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
ABCF3-205ENST00000466416 XIRP2A4UGR9 3374 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 C6orf222P0C671 652 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-205ENST00000466416 MYOGP15173 224 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 COPB2P35606 906 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 TMEM132BQ14DG7 1078 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 TMEM67Q5HYA8 995 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 SEZ6LQ9BYH1 1024 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 HIPK3Q9H422 1215 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 ADAMTS5Q9UNA0 930 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-205ENST00000466416 CHD7Q9P2D1 2997 aa11.24□□□□□ -0.61
ABCF3-205ENST00000466416 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 RFXAPO00287 272 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 SNAI1O95863 264 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-205ENST00000466416 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-205ENST00000466416 ATP2A2P16615 1042 aaKnown RBP11.23□□□□□ -0.61
ABCF3-205ENST00000466416 CYP7A1P22680 504 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 STAT3P40763 770 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 GJA9P57773 515 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 NHLH1Q02575 133 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 MTX1Q13505 466 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 SLC43A3Q8NBI5 491 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 UPF3AQ9H1J1 476 aaKnown RBP11.23□□□□□ -0.61
ABCF3-205ENST00000466416 SH2D4AQ9H788 454 aa11.23□□□□□ -0.61
ABCF3-205ENST00000466416 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
ABCF3-205ENST00000466416 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 POLR3DP05423 398 aaPredicted RBP11.22□□□□□ -0.61
ABCF3-205ENST00000466416 ALADP13716 330 aa11.22□□□□□ -0.61
ABCF3-205ENST00000466416 PLCD1P51178 756 aa11.22□□□□□ -0.61
ABCF3-205ENST00000466416 GABPAQ06546 454 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms