RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ITGB8P26012 769 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 TLE2Q04725 743 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 NCAPG2Q86XI2 1143 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 ITPRIPQ8IWB1 547 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 LCORLQ8N3X6 602 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 SDR42E1Q8WUS8 393 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 DCP1AQ9NPI6 582 aaPredicted RBP14.27□□□□□ -0.13
CNOT4-208ENST00000465721 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
CNOT4-208ENST00000465721 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 CCER2I3L3R5 266 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 FLOT1O75955 427 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 EPHB4P54760 987 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 PLS1Q14651 629 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 SLC9C2Q5TAH2 1124 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 SWAP70Q9UH65 585 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 TRANK1O15050 2925 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 LRRC37A2A6NM11 1700 aa14.26□□□□□ -0.13
CNOT4-208ENST00000465721 TMEM265A0A087WTH1 108 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 AKR1B1P15121 316 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 ICA1Q05084 483 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 TMEM132BQ14DG7 1078 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 TTF1Q15361 905 aaPredicted RBP14.25□□□□□ -0.13
CNOT4-208ENST00000465721 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
CNOT4-208ENST00000465721 DYNLL2Q96FJ2 89 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 ARHGEF10LQ9HCE6 1279 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 XPNPEP3Q9NQH7 507 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 NRBP1Q9UHY1 535 aa14.25□□□□□ -0.13
CNOT4-208ENST00000465721 A0A1W2PQ45 241 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-208ENST00000465721 A0A1W2PQY0 241 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 KIAA0355O15063 1070 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
CNOT4-208ENST00000465721 CLTBP09497 229 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 RARBP10826 455 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 FCER1AP12319 257 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 FOSL2P15408 326 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 LENG1Q96BZ8 264 aaPredicted RBP14.24□□□□□ -0.13
CNOT4-208ENST00000465721 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
CNOT4-208ENST00000465721 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 IL1RAPL2Q9NP60 686 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 FBXO28Q9NVF7 368 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 ADAMTS5Q9UNA0 930 aa14.24□□□□□ -0.13
CNOT4-208ENST00000465721 GOLIM4O00461 696 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 SLC25A27O95847 323 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 PGK1P00558 417 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 PGK2P07205 417 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 TAL1P17542 331 aaPredicted RBP14.23□□□□□ -0.13
CNOT4-208ENST00000465721 ZNF792Q3KQV3 632 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 RHPN1Q8TCX5 695 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.23□□□□□ -0.13
CNOT4-208ENST00000465721 MMP19Q99542 508 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 ZNF214Q9UL59 606 aaPredicted RBP14.23□□□□□ -0.13
CNOT4-208ENST00000465721 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
CNOT4-208ENST00000465721 PRKAB2O43741 272 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 ADAMTS4O75173 837 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
CNOT4-208ENST00000465721 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 RNF180Q86T96 592 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 RIOX2Q8IUF8 465 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
CNOT4-208ENST00000465721 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
CNOT4-208ENST00000465721 LCTP09848 1927 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 CYP2D7A0A087X1C5 515 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 PQBP1O60828 265 aaKnown RBP14.21□□□□□ -0.13
CNOT4-208ENST00000465721 MBD4O95243 580 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 ADD2P35612 726 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 FPGSQ05932 587 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 USP38Q8NB14 1042 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 CCDC17Q96LX7 622 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 PRDM6Q9NQX0 595 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
CNOT4-208ENST00000465721 DIS3Q9Y2L1 958 aaKnown RBP14.21□□□□□ -0.13
CNOT4-208ENST00000465721 SYNRGQ9UMZ2 1314 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 VWA5AO00534 786 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
CNOT4-208ENST00000465721 AKR1A1P14550 325 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 RAG1P15918 1043 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 DNAJB2P25686 324 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 CDK8P49336 464 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 FAAP100Q0VG06 881 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 KCTD2Q14681 263 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 GRIN2CQ14957 1233 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 C16orf86Q6ZW13 317 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 ANKRD33Q7Z3H0 272 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 XIRP2A4UGR9 3374 aa14.2□□□□□ -0.14
CNOT4-208ENST00000465721 CHGBP05060 677 aa14.19□□□□□ -0.14
CNOT4-208ENST00000465721 STAT3P40763 770 aa14.19□□□□□ -0.14
CNOT4-208ENST00000465721 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
CNOT4-208ENST00000465721 CLASRPQ8N2M8 674 aaKnown RBP14.19□□□□□ -0.14
CNOT4-208ENST00000465721 TOX2Q96NM4 488 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms