RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 CCDC96Q2M329 555 aa20.09■□□□□ 0.81
PRUNE1-208ENST00000462440 GPAT2Q6NUI2 795 aa20.09■□□□□ 0.81
PRUNE1-208ENST00000462440 RAB11FIP4Q86YS3 637 aa20.09■□□□□ 0.81
PRUNE1-208ENST00000462440 NUP133Q8WUM0 1156 aa20.09■□□□□ 0.81
PRUNE1-208ENST00000462440 RPAP3Q9H6T3 665 aaPredicted RBP20.09■□□□□ 0.81
PRUNE1-208ENST00000462440 GOLGA8BA8MQT2 603 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 BTBD19C9JJ37 291 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 BMP3P12645 472 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 RXRAP19793 462 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 GRM4Q14833 912 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 NOL8Q76FK4 1167 aaKnown RBP20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 PTPN18Q99952 460 aa20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 ISY1Q9ULR0 285 aaKnown RBP20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 NAP1L2Q9ULW6 460 aaPredicted RBP20.08■□□□□ 0.81
PRUNE1-208ENST00000462440 FRMPD2Q68DX3 1309 aaPredicted RBP20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 ZBTB43O43298 467 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 ST18O60284 1047 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 CALM1P0DP23 149 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 CALM2P0DP24 149 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 CALM3P0DP25 149 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 INHBEP58166 350 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 ANKRD23Q86SG2 305 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 FAM43AQ8N2R8 423 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 IL27Q8NEV9 243 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 TANGO6Q9C0B7 1094 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 NID2Q14112 1375 aa20.07■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L15C9J2P7 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L13C9JLJ4 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L11C9JVI0 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L18D6R9N7 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L22D6RA61 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L17D6RBQ6 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L19D6RCP7 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L20D6RJB6 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 CD2BP2O95400 341 aaKnown RBP20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 PARP1P09874 1014 aaKnown RBP20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 GOLGA8HP0CJ92 632 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 MAP2K2P36507 400 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 TM4SF4P48230 202 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 USP17L24Q0WX57 530 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 ASPRV1Q53RT3 343 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 IFNL1Q8IU54 200 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 MAP3K14Q99558 947 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 GPCPD1Q9NPB8 672 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 TPCN1Q9ULQ1 816 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 HPS5Q9UPZ3 1129 aa20.06■□□□□ 0.8
PRUNE1-208ENST00000462440 GOLGA8AA7E2F4 631 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 PDHXO00330 501 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 PDIA3P30101 505 aaKnown RBP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 HOXA7P31268 230 aaPredicted RBP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 RCAN1P53805 252 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 PABPC4Q13310 644 aaKnown RBP eCLIP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 GPATCH4Q5T3I0 446 aaKnown RBP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 CATSPERGQ6ZRH7 1159 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 STAG2Q8N3U4 1231 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 CTCFLQ8NI51 663 aaPredicted RBP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 ZNF274Q96GC6 653 aaPredicted RBP20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 FBXO28Q9NVF7 368 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 MAD2L2Q9UI95 211 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 SLC45A1Q9Y2W3 748 aa20.05■□□□□ 0.8
PRUNE1-208ENST00000462440 SMCHD1A6NHR9 2005 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 PALM3A6NDB9 673 aaPredicted RBP20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 TMEM232C9JQI7 657 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 FLOT1O75955 427 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 LARGE1O95461 756 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 METAP2P50579 478 aaKnown RBP eCLIP20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 TTBK2Q6IQ55 1244 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 REM2Q8IYK8 340 aaPredicted RBP20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 FANCBQ8NB91 859 aa20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 ASCC2Q9H1I8 757 aaPredicted RBP20.04■□□□□ 0.8
PRUNE1-208ENST00000462440 KIF5BP33176 963 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 STAT2P52630 851 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 IRX3P78415 501 aaPredicted RBP20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 STK3Q13188 491 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 RTN1Q16799 776 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 ZCCHC17Q9NP64 241 aaKnown RBP20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 FEM1BQ9UK73 627 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 LIMCH1Q9UPQ0 1083 aa20.03■□□□□ 0.8
PRUNE1-208ENST00000462440 KLRF2D3W0D1 207 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 OSBPP22059 807 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 SLC16A2P36021 539 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 CCT2P78371 535 aaKnown RBP20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 IKQ13123 557 aaPredicted RBP20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 ME3Q16798 604 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 FAM160B2Q86V87 743 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 DNAJC5GQ8N7S2 189 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 SLF1Q9BQI6 1058 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 CPVLQ9H3G5 476 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 PNMA3Q9UL41 463 aa20.02■□□□□ 0.8
PRUNE1-208ENST00000462440 MGAMO43451 1857 aa20.01■□□□□ 0.79
PRUNE1-208ENST00000462440 RBBP6Q7Z6E9 1792 aaKnown RBP20.01■□□□□ 0.79
PRUNE1-208ENST00000462440 PLA2G6O60733 806 aa20.01■□□□□ 0.79
PRUNE1-208ENST00000462440 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms