RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
SF3A3-204ENST00000462258 CCL14Q16627 93 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 PLEKHM2Q8IWE5 1019 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 TRMT44Q8IYL2 757 aaKnown RBP12.1□□□□□ -0.47
SF3A3-204ENST00000462258 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
SF3A3-204ENST00000462258 CEP95Q96GE4 821 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
SF3A3-204ENST00000462258 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
SF3A3-204ENST00000462258 NDUFB10O96000 172 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 PLS1Q14651 629 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 MAP3K21Q5TCX8 1036 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
SF3A3-204ENST00000462258 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 NUP88Q99567 741 aaPredicted RBP12.09□□□□□ -0.47
SF3A3-204ENST00000462258 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
SF3A3-204ENST00000462258 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
SF3A3-204ENST00000462258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
SF3A3-204ENST00000462258 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
SF3A3-204ENST00000462258 F5H6K3 240 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 TTLL1O95922 423 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 ERCC3P19447 782 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 KLRC3Q07444 240 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 FAM47AQ5JRC9 791 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 SYNPO2Q9UMS6 1093 aa12.08□□□□□ -0.48
SF3A3-204ENST00000462258 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 VWA5AO00534 786 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 TFRCP02786 760 aaKnown RBP12.07□□□□□ -0.48
SF3A3-204ENST00000462258 HOXC6P09630 235 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 CAPN2P17655 700 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 SDSP20132 328 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 ADORA2AP29274 412 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 TFAP4Q01664 338 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
SF3A3-204ENST00000462258 ALX1Q15699 326 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 MROH8Q9H579 483 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 ADAMTS5Q9UNA0 930 aa12.07□□□□□ -0.48
SF3A3-204ENST00000462258 CEP290O15078 2479 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 SLC25A27O95847 323 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 HSPD1P10809 573 aaKnown RBP12.06□□□□□ -0.48
SF3A3-204ENST00000462258 MFAP1P55081 439 aaKnown RBP12.06□□□□□ -0.48
SF3A3-204ENST00000462258 PPP4R3BQ5MIZ7 849 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 DPP9Q86TI2 863 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 REPS2Q8NFH8 660 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 NPLOC4Q8TAT6 608 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 MKL1Q969V6 931 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 HTATIP2Q9BUP3 242 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 FLRT1Q9NZU1 646 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
SF3A3-204ENST00000462258 STX8Q9UNK0 236 aa12.06□□□□□ -0.48
SF3A3-204ENST00000462258 HIP1O00291 1037 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 STRNO43815 780 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 ORC4O43929 436 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
SF3A3-204ENST00000462258 FGAP02671 866 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 PDE4AP27815 886 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
SF3A3-204ENST00000462258 COPB2P35606 906 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 CWC27Q6UX04 472 aaKnown RBP12.05□□□□□ -0.48
SF3A3-204ENST00000462258 RIOX2Q8IUF8 465 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 ABRAQ8N0Z2 381 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
SF3A3-204ENST00000462258 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 INCENPQ9NQS7 918 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 TOMM22Q9NS69 142 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
SF3A3-204ENST00000462258 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
SF3A3-204ENST00000462258 NMT2O60551 498 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 FCER1AP12319 257 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 BMP3P12645 472 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 CYP2C19P33261 490 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 STAT3P40763 770 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 HAND2P61296 217 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
SF3A3-204ENST00000462258 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
SF3A3-204ENST00000462258 NECAB2Q7Z6G3 386 aa12.04□□□□□ -0.48
SF3A3-204ENST00000462258 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms