RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 MAP3K14Q99558 947 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
C9orf78-203ENST00000461539 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
C9orf78-203ENST00000461539 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 A0A0G2JLL6 359 aaPredicted RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 WDR46O15213 610 aaKnown RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 VCAM1P19320 739 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 GTF2A2P52657 109 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 GRM1Q13255 1194 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 ASPRV1Q53RT3 343 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 GPATCH4Q5T3I0 446 aaKnown RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 CCDC82Q8N4S0 544 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 CCDC102AQ96A19 550 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
C9orf78-203ENST00000461539 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 MAD2L2Q9UI95 211 aa11.37□□□□□ -0.59
C9orf78-203ENST00000461539 PALM3A6NDB9 673 aaPredicted RBP11.36□□□□□ -0.59
C9orf78-203ENST00000461539 PPFIA3O75145 1194 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 PLEKHA8P1O95397 391 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
C9orf78-203ENST00000461539 CETPP11597 493 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 SLC16A2P36021 539 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 ST3GAL1Q11201 340 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 TTBK2Q6IQ55 1244 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 FASTKD5Q7L8L6 764 aaKnown RBP11.36□□□□□ -0.59
C9orf78-203ENST00000461539 CMTR1Q8N1G2 835 aaKnown RBP11.36□□□□□ -0.59
C9orf78-203ENST00000461539 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 TANGO6Q9C0B7 1094 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 UBA5Q9GZZ9 404 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 RPAP3Q9H6T3 665 aaPredicted RBP11.36□□□□□ -0.59
C9orf78-203ENST00000461539 SIPA1L1O43166 1804 aa11.36□□□□□ -0.59
C9orf78-203ENST00000461539 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 ECM29Q5VYK3 1845 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 MYH1P12882 1939 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CCL15-CCL14A0A0B4J2E2 113 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 DTNBO60941 627 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CDKL5O76039 1030 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 SLC10A3P09131 477 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CUL4AQ13619 759 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CCL15Q16663 113 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 SRBD1Q8N5C6 995 aaKnown RBP11.35□□□□□ -0.59
C9orf78-203ENST00000461539 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 PROCA1Q8NCQ7 364 aaPredicted RBP11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CHURC1Q8WUH1 139 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 PIBF1Q8WXW3 757 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 KIFC2Q96AC6 838 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 HHIPL1Q96JK4 782 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 CPVLQ9H3G5 476 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 VAT1LQ9HCJ6 419 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 LAMB1P07942 1786 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 PAPPA2Q9BXP8 1791 aa11.35□□□□□ -0.59
C9orf78-203ENST00000461539 NID2Q14112 1375 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 PTPDC1A2A3K4 754 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L15C9J2P7 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L13C9JLJ4 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L11C9JVI0 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L18D6R9N7 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L22D6RA61 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L17D6RBQ6 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L19D6RCP7 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L20D6RJB6 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 FLOT1O75955 427 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 IFNAR1P17181 557 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 STAT2P52630 851 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 AKAP17AQ02040 695 aaKnown RBP11.34□□□□□ -0.59
C9orf78-203ENST00000461539 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
C9orf78-203ENST00000461539 USP17L24Q0WX57 530 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 DEFB115Q30KQ5 88 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 CYP4F22Q6NT55 531 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 NBPF11Q86T75 865 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
C9orf78-203ENST00000461539 BRI3BPQ8WY22 251 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 PHKBQ93100 1093 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 SLC26A6Q9BXS9 759 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 FBXO28Q9NVF7 368 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 AGTPBP1Q9UPW5 1226 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 SMC3Q9UQE7 1217 aa11.34□□□□□ -0.59
C9orf78-203ENST00000461539 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.34□□□□□ -0.59
C9orf78-203ENST00000461539 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
C9orf78-203ENST00000461539 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms