RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CDC25AP30304 524 aa15.58■□□□□ 0.08
CLK3-203ENST00000454830 KLHL10Q6JEL2 608 aa15.58■□□□□ 0.08
CLK3-203ENST00000454830 METTL16Q86W50 562 aaKnown RBP15.58■□□□□ 0.08
CLK3-203ENST00000454830 PIGSQ96S52 555 aa15.58■□□□□ 0.08
CLK3-203ENST00000454830 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
CLK3-203ENST00000454830 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.08
CLK3-203ENST00000454830 IKQ13123 557 aaPredicted RBP15.57■□□□□ 0.08
CLK3-203ENST00000454830 POSTNQ15063 836 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
CLK3-203ENST00000454830 DHX40Q8IX18 779 aaKnown RBP15.57■□□□□ 0.08
CLK3-203ENST00000454830 TIGD1Q96MW7 591 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 CYTH3O43739 400 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 BMP15O95972 392 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 SUGT1Q9Y2Z0 365 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 SMTNL1A8MU46 457 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 SERPINC1P01008 464 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 CREBRFQ8IUR6 639 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 ZFPM1Q8IX07 1006 aa15.57■□□□□ 0.08
CLK3-203ENST00000454830 OSBPL5Q9H0X9 879 aaPredicted RBP15.57■□□□□ 0.08
CLK3-203ENST00000454830 CDK11BP21127 795 aaKnown RBP15.56■□□□□ 0.08
CLK3-203ENST00000454830 CASP1P29466 404 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 LRMPQ12912 555 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 JAKMIP3Q5VZ66 844 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 TYW1BQ6NUM6 668 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 PLIN2Q99541 437 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 TCP11L1Q9NUJ3 509 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 SMCO2A6NFE2 343 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 RAD17O75943 681 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 BAG6P46379 1132 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 LETM2Q2VYF4 491 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 STYK1Q6J9G0 422 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.56■□□□□ 0.08
CLK3-203ENST00000454830 TDRD3Q9H7E2 651 aaKnown RBP15.56■□□□□ 0.08
CLK3-203ENST00000454830 IFNKQ9P0W0 207 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 TPM3P06753 285 aa15.56■□□□□ 0.08
CLK3-203ENST00000454830 APOBEC3HQ6NTF7 200 aaKnown RBP15.56■□□□□ 0.08
CLK3-203ENST00000454830 SLC16A2P36021 539 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 LARGE2Q8N3Y3 721 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 C6orf50Q9HD87 102 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 MTMR4Q9NYA4 1195 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 TXLNAP40222 546 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
CLK3-203ENST00000454830 FERMT2Q96AC1 680 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 LZTS2Q9BRK4 669 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
CLK3-203ENST00000454830 PALM3A6NDB9 673 aaPredicted RBP15.55■□□□□ 0.08
CLK3-203ENST00000454830 HHIPL2Q6UWX4 724 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 KCTD1Q719H9 257 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 COA7Q96BR5 231 aa15.55■□□□□ 0.08
CLK3-203ENST00000454830 NPY5RQ15761 445 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 ANKS1AQ92625 1134 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 TTLL1O95922 423 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 GDF11O95390 407 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 KANK3Q6NY19 840 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 TRMT44Q8IYL2 757 aaKnown RBP15.54■□□□□ 0.08
CLK3-203ENST00000454830 BARHL2Q9NY43 387 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 PYCARDQ9ULZ3 195 aa15.54■□□□□ 0.08
CLK3-203ENST00000454830 CLRN2A0PK11 232 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 MARCH6O60337 910 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 SLC35G1Q2M3R5 365 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 TMC6Q7Z403 805 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 PLA2G4DQ86XP0 818 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
CLK3-203ENST00000454830 TMOD2Q9NZR1 351 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 ZNF500O60304 480 aaPredicted RBP15.53■□□□□ 0.08
CLK3-203ENST00000454830 NOLC1Q14978 699 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLK3-203ENST00000454830 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
CLK3-203ENST00000454830 MAST2Q6P0Q8 1798 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 TCP10L2B9ZVM9 353 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 STXBP3O00186 592 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 CCNT1O60563 726 aaKnown RBP15.53■□□□□ 0.08
CLK3-203ENST00000454830 GNA11P29992 359 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 NT5C2P49902 561 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 STX17P56962 302 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 MYL5Q02045 173 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 CERKLQ49MI3 558 aaPredicted RBP15.53■□□□□ 0.08
CLK3-203ENST00000454830 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 DTHD1Q6ZMT9 781 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 TTLL6Q8N841 843 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 CAMKK2Q96RR4 588 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 VEZTQ9HBM0 779 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 SWAP70Q9UH65 585 aa15.53■□□□□ 0.08
CLK3-203ENST00000454830 PDHBP11177 359 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 ATP1A3P13637 1013 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 UBA7P41226 1012 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 DHX8Q14562 1220 aaKnown RBP15.52■□□□□ 0.08
CLK3-203ENST00000454830 PTPN21Q16825 1174 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
CLK3-203ENST00000454830 XPO4Q9C0E2 1151 aaKnown RBP15.52■□□□□ 0.08
CLK3-203ENST00000454830 RGS17Q9UGC6 210 aaPredicted RBP15.52■□□□□ 0.08
CLK3-203ENST00000454830 MAN1B1Q9UKM7 699 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 SNED1Q8TER0 1413 aa15.52■□□□□ 0.08
CLK3-203ENST00000454830 TPD52L1Q16890 204 aaPredicted RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms