RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 BMP3P12645 472 aa32.9■■■□□ 2.86
SMARCC1-203ENST00000454240 HSPA4P34932 840 aa32.9■■■□□ 2.86
SMARCC1-203ENST00000454240 RASEFQ8IZ41 740 aa32.9■■■□□ 2.86
SMARCC1-203ENST00000454240 FBXO28Q9NVF7 368 aa32.9■■■□□ 2.86
SMARCC1-203ENST00000454240 RABGAP1Q9Y3P9 1069 aa32.9■■■□□ 2.86
SMARCC1-203ENST00000454240 MCCP23508 829 aa32.89■■■□□ 2.86
SMARCC1-203ENST00000454240 SEC23AQ15436 765 aa32.89■■■□□ 2.86
SMARCC1-203ENST00000454240 ADAMTS5Q9UNA0 930 aa32.89■■■□□ 2.86
SMARCC1-203ENST00000454240 COL11A1P12107 1806 aaPredicted RBP32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 PEX10O60683 326 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 CNMDO75829 334 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 CTGFP29279 349 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 KIF22Q14807 665 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 CTU1Q7Z7A3 348 aaKnown RBP32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 GPRC5AQ8NFJ5 357 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 USP26Q9BXU7 913 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 ARHGAP39Q9C0H5 1083 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 PPP1R9AQ9ULJ8 1098 aa32.88■■■□□ 2.85
SMARCC1-203ENST00000454240 ZKSCAN1P17029 563 aaPredicted RBP32.87■■■□□ 2.85
SMARCC1-203ENST00000454240 SLC1A4P43007 532 aa32.87■■■□□ 2.85
SMARCC1-203ENST00000454240 ANTXR2P58335 489 aa32.87■■■□□ 2.85
SMARCC1-203ENST00000454240 Q3C1V9 767 aa32.87■■■□□ 2.85
SMARCC1-203ENST00000454240 PAGR1Q9BTK6 254 aa32.87■■■□□ 2.85
SMARCC1-203ENST00000454240 ERVK-9P63128 1117 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 ERVK-24P63145 666 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 ARHGEF6Q15052 776 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 CHST3Q7LGC8 479 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 DCAF4Q8WV16 495 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 ATG4CQ96DT6 458 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 BTBD7Q9P203 1132 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 FEM1BQ9UK73 627 aa32.86■■■□□ 2.85
SMARCC1-203ENST00000454240 PSMC4P43686 418 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 COL9A3Q14050 684 aaPredicted RBP32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 RASGRP2Q7LDG7 609 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 OTOP1Q7RTM1 612 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 MB21D1Q8N884 522 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 SLF1Q9BQI6 1058 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 KAT14Q9H8E8 782 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 EFCC1Q9HA90 598 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 DOCK3Q8IZD9 2030 aa32.85■■■□□ 2.85
SMARCC1-203ENST00000454240 IFIT3O14879 490 aaKnown RBP32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 PDHBP11177 359 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 MCM5P33992 734 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 KRT32Q14532 448 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 IFIT1BQ5T764 474 aaKnown RBP32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 PRPF38AQ8NAV1 312 aaKnown RBP32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 PNMA1Q8ND90 353 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 IGDCC4Q8TDY8 1250 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 CHMP4CQ96CF2 233 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 TRIM47Q96LD4 638 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 MTA3Q9BTC8 594 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 MTMR7Q9Y216 660 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 TRIM17Q9Y577 477 aa32.84■■■□□ 2.85
SMARCC1-203ENST00000454240 PLA2G6O60733 806 aa32.83■■■□□ 2.85
SMARCC1-203ENST00000454240 SNHG28P0DPA3 235 aa32.83■■■□□ 2.85
SMARCC1-203ENST00000454240 SART3Q15020 963 aaKnown RBP32.83■■■□□ 2.85
SMARCC1-203ENST00000454240 ADCK5Q3MIX3 580 aa32.83■■■□□ 2.85
SMARCC1-203ENST00000454240 NEK1Q96PY6 1258 aa32.83■■■□□ 2.85
SMARCC1-203ENST00000454240 ERICH2A1L162 156 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 TMEM232C9JQI7 657 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 GNRH1P01148 92 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 FCGRTP55899 365 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 SAMD1Q6SPF0 538 aaPredicted RBP32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 KCTD1Q719H9 257 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 SNX14Q9Y5W7 946 aa32.82■■■□□ 2.84
SMARCC1-203ENST00000454240 VWA5AO00534 786 aa32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 PRC1O43663 620 aa32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 ECM2O94769 699 aaPredicted RBP32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 FMNL1O95466 1100 aaPredicted RBP32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 STAT2P52630 851 aa32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 FAM160B2Q86V87 743 aa32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 CHURC1Q8WUH1 139 aa32.81■■■□□ 2.84
SMARCC1-203ENST00000454240 WTAPQ15007 396 aa32.8■■■□□ 2.84
SMARCC1-203ENST00000454240 PKN2Q16513 984 aaKnown RBP32.8■■■□□ 2.84
SMARCC1-203ENST00000454240 TMEM67Q5HYA8 995 aa32.8■■■□□ 2.84
SMARCC1-203ENST00000454240 REPS2Q8NFH8 660 aa32.8■■■□□ 2.84
SMARCC1-203ENST00000454240 EIF5BO60841 1220 aaKnown RBP32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 ZNF543Q08ER8 600 aa32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 CCDC96Q2M329 555 aa32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 KIFC2Q96AC6 838 aa32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 TMEM87BQ96K49 555 aa32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 SENP2Q9HC62 589 aa32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 ISY1Q9ULR0 285 aaKnown RBP32.79■■■□□ 2.84
SMARCC1-203ENST00000454240 CCNA1P78396 465 aa32.78■■■□□ 2.84
SMARCC1-203ENST00000454240 TMEM132BQ14DG7 1078 aa32.78■■■□□ 2.84
SMARCC1-203ENST00000454240 BTNL9Q6UXG8 535 aa32.78■■■□□ 2.84
SMARCC1-203ENST00000454240 SPATC1LQ9H0A9 340 aa32.78■■■□□ 2.84
SMARCC1-203ENST00000454240 PORCNQ9H237 461 aa32.78■■■□□ 2.84
SMARCC1-203ENST00000454240 TNPO2O14787 897 aaKnown RBP32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 EXOSC10Q01780 885 aaKnown RBP32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 TTBK2Q6IQ55 1244 aa32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 MCOLN1Q9GZU1 580 aa32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 LY9Q9HBG7 655 aa32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 FRMPD2Q68DX3 1309 aaPredicted RBP32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 WDR19Q8NEZ3 1342 aa32.77■■■□□ 2.84
SMARCC1-203ENST00000454240 HMGB1P09429 215 aaKnown RBP32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 FDX1P10109 184 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 HOXD10P28358 340 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 MAPK4P31152 587 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 C8orf34Q49A92 452 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms