RNA–Protein interactions for RNA: ENST00000453828.1

AC099541.1-201, humanhuman

TSL 2 BASIC

Gene AC099541.1, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099541.1-201ENST00000453828 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 JAKMIP1Q96N16 626 aaKnown RBP13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 LBHD1Q9BQE6 289 aaPredicted RBP13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
AC099541.1-201ENST00000453828 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 HMGB1P09429 215 aaKnown RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 CNGA1P29973 690 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 PLCD1P51178 756 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 EVX2Q03828 476 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 CTDSPL2Q05D32 466 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 CACNB2Q08289 660 aaPredicted RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 RRP1BQ14684 758 aaKnown RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 GTF3C2Q8WUA4 911 aaPredicted RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 SNX21Q969T3 373 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 TTC14Q96N46 770 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 WDR18Q9BV38 432 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 PRKAG2Q9UGJ0 569 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 SAP30BPQ9UHR5 308 aaKnown RBP13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 STXBP5LQ9Y2K9 1186 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 FOCADQ5VW36 1801 aa13.73□□□□□ -0.21
AC099541.1-201ENST00000453828 PFASO15067 1338 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 ORC4O43929 436 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 XRCC5P13010 732 aaKnown RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 CASTP20810 708 aaKnown RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 RPS6KB1P23443 525 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 CCND3P30281 292 aaPredicted RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 NEK4P51957 841 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 ERVK-24P63145 666 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 GABPAQ06546 454 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 CCL14Q16627 93 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 MFSD14CQ5VZR4 134 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 GPR142Q7Z601 462 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 TTC6Q86TZ1 520 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 METTL16Q86W50 562 aaKnown RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 MB21D2Q8IYB1 491 aaPredicted RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 APBA2Q99767 749 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 TXNRD2Q9NNW7 524 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 MTMR10Q9NXD2 777 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
AC099541.1-201ENST00000453828 WDR19Q8NEZ3 1342 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 CPA1P15085 419 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 NT5C2P49902 561 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 CCNA1P78396 465 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 BLOC1S2Q6QNY1 142 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 USP17L2Q6R6M4 530 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 AMOTL1Q8IY63 956 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 FBXL16Q8N461 479 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 NCOA7Q8NI08 942 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 FAM161BQ96MY7 647 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 EHD4Q9H223 541 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 PORCNQ9H237 461 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 CNNM2Q9H8M5 875 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
AC099541.1-201ENST00000453828 NEDD4P46934 1319 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 SLC3A2P08195 630 aaKnown RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 ANP32AP39687 249 aaKnown RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 ANTXR2P58335 489 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 LRRC26Q2I0M4 334 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 SHROOM1Q2M3G4 852 aaPredicted RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 MAP3K21Q5TCX8 1036 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 AGXT2Q9BYV1 514 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 KRT23Q9C075 422 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 RBPJLQ9UBG7 517 aa13.7□□□□□ -0.22
AC099541.1-201ENST00000453828 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 GH2P01242 217 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 ATP2B2Q01814 1243 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 PDE4BQ07343 736 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 TRDNQ13061 729 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 Q3C1V9 767 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 GINM1Q9NU53 330 aa13.69□□□□□ -0.22
AC099541.1-201ENST00000453828 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms