RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 RUNDC3BQ96NL0 473 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 TXNDC16Q9P2K2 825 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 TPD52P55327 224 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-202ENST00000449880 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
ITGB4-202ENST00000449880 SPOPO43791 374 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 PNMA6AP0CW24 399 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-202ENST00000449880 DNM2P50570 870 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 CCDC197Q8NCU1 140 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 VCX3AQ9NNX9 186 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-202ENST00000449880 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-202ENST00000449880 CDC42BPGQ6DT37 1551 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 ALS2CLQ60I27 953 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 KRT40Q6A162 431 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 SARM1Q6SZW1 724 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 CLEC17AQ6ZS10 378 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 KLHL7Q8IXQ5 586 aa15.38■□□□□ 0.05
ITGB4-202ENST00000449880 I3L4J1 428 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 CETN3O15182 167 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 MBD4O95243 580 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 INF2Q27J81 1249 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 CCDC87Q9NVE4 849 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 SPATA1Q5VX52 437 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RGS22Q8NE09 1264 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 APPBP2Q92624 585 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RNF14Q9UBS8 474 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 FRMD4BQ9Y2L6 1034 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 POLR1AO95602 1720 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-202ENST00000449880 MYO1CO00159 1063 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 ZNF174Q15697 407 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RABEP2Q9H5N1 569 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 CCDC169A6NNP5 214 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 STX2P32856 288 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 HSP90AA5PQ58FG0 334 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 LGSNQ5TDP6 509 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RPUSD2Q8IZ73 545 aaKnown RBP15.37■□□□□ 0.05
ITGB4-202ENST00000449880 CNOT10Q9H9A5 744 aaKnown RBP15.37■□□□□ 0.05
ITGB4-202ENST00000449880 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
ITGB4-202ENST00000449880 PEX26Q7Z412 305 aa15.37■□□□□ 0.05
ITGB4-202ENST00000449880 RNASELQ05823 741 aaKnown RBP15.36■□□□□ 0.05
ITGB4-202ENST00000449880 STAG1Q8WVM7 1258 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
ITGB4-202ENST00000449880 PNOCQ13519 176 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 PROSER3Q2NL68 480 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 FBXO38Q6PIJ6 1188 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 KCNJ18B7U540 433 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 H7C1D1 291 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 KCNJ12Q14500 433 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 CACTINQ8WUQ7 758 aaKnown RBP15.36■□□□□ 0.05
ITGB4-202ENST00000449880 DENND2AQ9ULE3 1009 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 ARL1P40616 181 aaPredicted RBP15.36■□□□□ 0.05
ITGB4-202ENST00000449880 PKP1Q13835 747 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 RTEL1Q9NZ71 1219 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 STAP2Q9UGK3 403 aa15.36■□□□□ 0.05
ITGB4-202ENST00000449880 SUN1O94901 812 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
ITGB4-202ENST00000449880 KLHL30Q0D2K2 578 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 TADA2BQ86TJ2 420 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 GNPATO15228 680 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 TAF12Q16514 161 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 BACH1O14867 736 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 EAF2Q96CJ1 260 aaPredicted RBP15.35■□□□□ 0.05
ITGB4-202ENST00000449880 GLT8D2Q9H1C3 349 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
ITGB4-202ENST00000449880 JAK2O60674 1132 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 MORC3Q14149 939 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 LIN9Q5TKA1 542 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.34■□□□□ 0.05
ITGB4-202ENST00000449880 GPAA1O43292 621 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 PSMC4P43686 418 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 TRAPPC3LQ5T215 181 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 TTLL7Q6ZT98 887 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 CCDC117Q8IWD4 279 aaPredicted RBP15.34■□□□□ 0.05
ITGB4-202ENST00000449880 LPIN2Q92539 896 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 AMFRQ9UKV5 643 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 CLTCQ00610 1675 aaKnown RBP15.34■□□□□ 0.05
ITGB4-202ENST00000449880 AFAP1L2Q8N4X5 818 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 GRK7Q8WTQ7 553 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 MROH5Q6ZUA9 1318 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 RXRAP19793 462 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 HAUS3Q68CZ6 603 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 SIRT2Q8IXJ6 389 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 USP28Q96RU2 1077 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 ZKSCAN3Q9BRR0 538 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 DESI2Q9BSY9 194 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 PARD6BQ9BYG5 372 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 NUF2Q9BZD4 464 aa15.34■□□□□ 0.05
ITGB4-202ENST00000449880 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms