RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 A0A1B0GVL5 298 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 GUCY1B3Q02153 619 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 KLF18A0A0U1RQI7 1052 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZNF213O14771 459 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 GCKP35557 465 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
SYNGAP1-204ENST00000449372 PPP6R2O75170 966 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 RASGRF1Q13972 1273 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 AMIGO3Q86WK7 504 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 VSTM4Q8IW00 320 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 TNRC6CQ9HCJ0 1690 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 KCNQ4P56696 695 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 CAPS2Q9BXY5 557 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 LZTFL1Q9NQ48 299 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZNF804BA4D1E1 1349 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 ONECUT3O60422 494 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 STX10O60499 249 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 SKAP2O75563 359 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 KIF4BQ2VIQ3 1234 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 CPSF2Q9P2I0 782 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZMYM6O95789 1325 aa15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 COL1A1P02452 1464 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-204ENST00000449372 CTAGE15A4D2H0 777 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 TTC36A6NLP5 189 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 PRC1O43663 620 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 CTAGE8P0CG41 777 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ANTXR2P58335 489 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 B4GALNT4Q76KP1 1039 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 CTAGE6Q86UF2 777 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 CTAGE4Q8IX94 777 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 SPATA5Q8NB90 893 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZNF652Q9Y2D9 606 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 EP400Q96L91 3159 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 GOLGA6CA6NDK9 693 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 GOLGA6DP0CG33 693 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 PDE6AP16499 860 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 NAA25Q14CX7 972 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 KIRREL3Q8IZU9 778 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 GOLGA6AQ9NYA3 693 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 TMEM232C9JQI7 657 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ADD1P35611 737 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 IRAK4Q9NWZ3 460 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 HPCAL4Q9UM19 191 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 EME2A4GXA9 379 aaPredicted RBP15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 EIF3HO15372 352 aaKnown RBP eCLIP15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 MYBL2P10244 700 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 SLC5A1P13866 664 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 GGCXP38435 758 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 NDUFA8P51970 172 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 PPFIA1Q13136 1202 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 STIM1Q13586 685 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 ZC3H12AQ5D1E8 599 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 PPFIBP1Q86W92 1011 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 TRIM22Q8IYM9 498 aa15.11■□□□□ 0.01
SYNGAP1-204ENST00000449372 GNGT1P63211 74 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 CHRNDQ07001 517 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 MEFVO15553 781 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 KIF5CO60282 957 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 RPS6KA4O75676 772 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 POLR3DP05423 398 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 CDR1P51861 262 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 NFXL1Q6ZNB6 911 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 SMIM5Q71RC9 77 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 ELOA2Q8IYF1 753 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 STRBPQ96SI9 672 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 MRPL44Q9H9J2 332 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 USP21Q9UK80 565 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 CAND2O75155 1236 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 IPO7O95373 1038 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 XBP1P17861 261 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 ARHGAP25P42331 645 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 NUCKS1Q9H1E3 243 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 DDX20Q9UHI6 824 aaKnown RBP15.1■□□□□ 0.01
SYNGAP1-204ENST00000449372 TFRCP02786 760 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 EZRP15311 586 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 ALX1Q15699 326 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 TRIML1Q8N9V2 468 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 CRACR2AQ9BSW2 395 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 NAA15Q9BXJ9 866 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 FANCLQ9NW38 375 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 UBR3Q6ZT12 1888 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 NDUFAB1O14561 156 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 PFKFB1P16118 471 aa15.09■□□□□ 0.01
SYNGAP1-204ENST00000449372 MCM3P25205 808 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms