RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TTLL1O95922 423 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 CYP2B6P20813 491 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 PTPREP23469 700 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 GJA8P48165 433 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 UBXN2AP68543 259 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 TRIM32Q13049 653 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 MAP3K21Q5TCX8 1036 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 SHCBP1Q8NEM2 672 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 TRIB2Q92519 343 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 NUP88Q99567 741 aaPredicted RBP16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 RNF208Q9H0X6 261 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
RTFDC1-204ENST00000449062 MYH8P13535 1937 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 HIP1O00291 1037 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 VWA5AO00534 786 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 HOXC6P09630 235 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 UBE2Q1Q7Z7E8 422 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 GMCL1P1Q8NEA9 526 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
RTFDC1-204ENST00000449062 RBBP6Q7Z6E9 1792 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 NMT2O60551 498 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 HMGCRP04035 888 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 ERCC3P19447 782 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 MFAP1P55081 439 aaKnown RBP16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 GRB14Q14449 540 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 CCL14Q16627 93 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 DIAPH3Q9NSV4 1193 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 TCP11L1Q9NUJ3 509 aa16.69■□□□□ 0.26
RTFDC1-204ENST00000449062 STRNO43815 780 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 SGPL1O95470 568 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 RGS2P41220 211 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 TBC1D10CQ8IV04 446 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
RTFDC1-204ENST00000449062 RANBP6O60518 1105 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 CHMLP26374 656 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 HAND2P61296 217 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 SLFN13Q68D06 897 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 RIOX2Q8IUF8 465 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 STAG1Q8WVM7 1258 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 SLF1Q9BQI6 1058 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 MROH8Q9H579 483 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 FLRT1Q9NZU1 646 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
RTFDC1-204ENST00000449062 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 COBLO75128 1261 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 STAT3P40763 770 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 CACNB2Q08289 660 aaPredicted RBP16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 RCSD1Q6JBY9 416 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 NPLOC4Q8TAT6 608 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 GMCL1Q96IK5 515 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 APBA2Q99767 749 aa16.66■□□□□ 0.26
RTFDC1-204ENST00000449062 RAD21O60216 631 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 PLA2G6O60733 806 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 SLC25A27O95847 323 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 BMP3P12645 472 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 CAPN2P17655 700 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 PPP4R3BQ5MIZ7 849 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 MFSD6Q6ZSS7 791 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 FEM1BQ9UK73 627 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 A0A0G2JMZ2 1700 aa16.65■□□□□ 0.26
RTFDC1-204ENST00000449062 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 ZNF213O14771 459 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 MCCP23508 829 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 ADORA2AP29274 412 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 PLS1Q14651 629 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 WDR78Q5VTH9 848 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 TTC14Q96N46 770 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 SLC38A10Q9HBR0 1119 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 HMX1Q9NP08 348 aaPredicted RBP16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 STX8Q9UNK0 236 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 IVNS1ABPQ9Y6Y0 642 aa16.64■□□□□ 0.25
RTFDC1-204ENST00000449062 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 MNX1P50219 401 aaPredicted RBP16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 LHX8Q68G74 356 aa16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 TMEM47Q9BQJ4 181 aa16.63■□□□□ 0.25
RTFDC1-204ENST00000449062 SGSM2O43147 1006 aa16.62■□□□□ 0.25
RTFDC1-204ENST00000449062 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms