RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 TEX11Q8IYF3 940 aa25.43■■□□□ 1.66
PREB-206ENST00000444452 GSDMAQ96QA5 445 aa25.43■■□□□ 1.66
PREB-206ENST00000444452 POLLQ9UGP5 575 aa25.43■■□□□ 1.66
PREB-206ENST00000444452 LTBP1Q14766 1721 aa25.43■■□□□ 1.66
PREB-206ENST00000444452 PSDA5PKW4 1024 aaPredicted RBP25.42■■□□□ 1.66
PREB-206ENST00000444452 PALM3A6NDB9 673 aaPredicted RBP25.42■■□□□ 1.66
PREB-206ENST00000444452 POLRMTO00411 1230 aaKnown RBP25.42■■□□□ 1.66
PREB-206ENST00000444452 MFSD14BQ5SR56 506 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 DAGLBQ8NCG7 672 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 CCDC112Q8NEF3 446 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 CCDC148Q8NFR7 591 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 TMEM47Q9BQJ4 181 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
PREB-206ENST00000444452 FLT1P17948 1338 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 M0R2N6 131 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 KIF2AO00139 706 aaPredicted RBP25.42■■□□□ 1.66
PREB-206ENST00000444452 RHBDL3P58872 404 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 DPYDQ12882 1025 aa25.42■■□□□ 1.66
PREB-206ENST00000444452 ADAMTS3O15072 1205 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 CDK8P49336 464 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 E2F4Q16254 413 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 E4F1Q66K89 784 aaPredicted RBP25.41■■□□□ 1.66
PREB-206ENST00000444452 GPKOWQ92917 476 aaPredicted RBP eCLIP25.41■■□□□ 1.667e-6■■■■■ 33.4
PREB-206ENST00000444452 MED15Q96RN5 788 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 INTS13Q9NVM9 706 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 STX8Q9UNK0 236 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 FAM205AQ6ZU69 1335 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 TOP1P11387 765 aaKnown RBP25.41■■□□□ 1.66
PREB-206ENST00000444452 MCM7P33993 719 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 AFMP43652 599 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 IQUBQ8NA54 791 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 NEDD1Q8NHV4 660 aa25.41■■□□□ 1.66
PREB-206ENST00000444452 BAZ2BQ9UIF8 2168 aaKnown RBP25.4■■□□□ 1.66
PREB-206ENST00000444452 CYTH3O43739 400 aa25.4■■□□□ 1.66
PREB-206ENST00000444452 SLC35G1Q2M3R5 365 aa25.4■■□□□ 1.66
PREB-206ENST00000444452 TSC1Q92574 1164 aa25.4■■□□□ 1.66
PREB-206ENST00000444452 TRMT1Q9NXH9 659 aaKnown RBP25.4■■□□□ 1.66
PREB-206ENST00000444452 LONP1P36776 959 aaKnown RBP25.39■■□□□ 1.66
PREB-206ENST00000444452 TYW1BQ6NUM6 668 aa25.39■■□□□ 1.66
PREB-206ENST00000444452 C4orf32Q8N8J7 132 aa25.39■■□□□ 1.66
PREB-206ENST00000444452 EYA3Q99504 573 aa25.39■■□□□ 1.66
PREB-206ENST00000444452 TMX1Q9H3N1 280 aa25.39■■□□□ 1.66
PREB-206ENST00000444452 BARHL2Q9NY43 387 aa25.39■■□□□ 1.66
PREB-206ENST00000444452 TMEM232C9JQI7 657 aa25.39■■□□□ 1.65
PREB-206ENST00000444452 HMGB2P26583 209 aaKnown RBP25.39■■□□□ 1.65
PREB-206ENST00000444452 IL17AQ16552 155 aa25.39■■□□□ 1.65
PREB-206ENST00000444452 WWC2Q6AWC2 1192 aa25.39■■□□□ 1.65
PREB-206ENST00000444452 TRMT44Q8IYL2 757 aaKnown RBP25.39■■□□□ 1.65
PREB-206ENST00000444452 ZNF710Q8N1W2 664 aa25.39■■□□□ 1.65
PREB-206ENST00000444452 SPZ1Q9BXG8 430 aa25.39■■□□□ 1.65
PREB-206ENST00000444452 CDK11BP21127 795 aaKnown RBP25.37■■□□□ 1.65
PREB-206ENST00000444452 CUL4BQ13620 913 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 SP8Q8IXZ3 490 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 CCDC194A0A1B0GVG4 234 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 STXBP3O00186 592 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 HSPA1LP34931 641 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 NOVP48745 357 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 TBX2Q13207 712 aaPredicted RBP25.37■■□□□ 1.65
PREB-206ENST00000444452 SYCP1Q15431 976 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 PDXDC2PQ6P474 469 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 PPP1R13BQ96KQ4 1090 aa25.37■■□□□ 1.65
PREB-206ENST00000444452 C6orf229H3BNL8 230 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 SPATA1Q5VX52 437 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 QTRT2Q9H974 415 aaKnown RBP25.36■■□□□ 1.65
PREB-206ENST00000444452 PCDHA6Q9UN73 950 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 PCDHA8Q9Y5H6 950 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 PPEF1O14829 653 aaPredicted RBP25.36■■□□□ 1.65
PREB-206ENST00000444452 CCP110O43303 1012 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 HEATR3Q7Z4Q2 680 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 SAMSN1Q9NSI8 373 aaKnown RBP25.36■■□□□ 1.65
PREB-206ENST00000444452 SUGT1Q9Y2Z0 365 aa25.36■■□□□ 1.65
PREB-206ENST00000444452 FOCADQ5VW36 1801 aa25.35■■□□□ 1.65
PREB-206ENST00000444452 SYNRGQ9UMZ2 1314 aa25.35■■□□□ 1.65
PREB-206ENST00000444452 KLRF2D3W0D1 207 aa25.35■■□□□ 1.65
PREB-206ENST00000444452 TUBB4AP04350 444 aa25.35■■□□□ 1.65
PREB-206ENST00000444452 SMARCA1P28370 1054 aa25.35■■□□□ 1.65
PREB-206ENST00000444452 CD44P16070 742 aaKnown RBP25.34■■□□□ 1.65
PREB-206ENST00000444452 CASP1P29466 404 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 TXLNAP40222 546 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 SPECC1LQ69YQ0 1117 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 KRT27Q7Z3Y8 459 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 RASGRP4Q8TDF6 673 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 ZNF592Q92610 1267 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 COA1Q9GZY4 146 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 GTPBP6O43824 516 aaPredicted RBP25.34■■□□□ 1.65
PREB-206ENST00000444452 PARP1P09874 1014 aaKnown RBP25.34■■□□□ 1.65
PREB-206ENST00000444452 HSP90AA4PQ58FG1 418 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 FCHSD1Q86WN1 690 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 KIF18AQ8NI77 898 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 CCDC12Q8WUD4 166 aaPredicted RBP25.34■■□□□ 1.65
PREB-206ENST00000444452 ZMYND12Q9H0C1 365 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 DAGLAQ9Y4D2 1042 aa25.34■■□□□ 1.65
PREB-206ENST00000444452 MYH1P12882 1939 aa25.33■■□□□ 1.65
PREB-206ENST00000444452 A0A1B0GTH6 734 aa25.33■■□□□ 1.65
PREB-206ENST00000444452 PPP1R3GB7ZBB8 358 aa25.33■■□□□ 1.65
PREB-206ENST00000444452 LAD1O00515 517 aa25.33■■□□□ 1.65
PREB-206ENST00000444452 TRIM37O94972 964 aa25.33■■□□□ 1.65
PREB-206ENST00000444452 ANKRD7Q92527 254 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms