RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ZKSCAN1P17029 563 aaPredicted RBP22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 PDE4BQ07343 736 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 FAM83BQ5T0W9 1011 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 NEDD1Q8NHV4 660 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 CEP95Q96GE4 821 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 MTMR4Q9NYA4 1195 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 FLRT1Q9NZU1 646 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 TACC3Q9Y6A5 838 aa22.53■■□□□ 1.2
HMGB3P22-201ENST00000442010 PLXNA1Q9UIW2 1896 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 F5H6K3 240 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 FARP2O94887 1054 aaPredicted RBP22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 ERCC3P19447 782 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 KLRC3Q07444 240 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 CACNB2Q08289 660 aaPredicted RBP22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 TMEM132BQ14DG7 1078 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 ALX1Q15699 326 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 MCMDC2Q4G0Z9 681 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 WDR78Q5VTH9 848 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 CWC22Q9HCG8 908 aaKnown RBP22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 CLIP2Q9UDT6 1046 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 ANAPC4Q9UJX5 808 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 PPP1R9AQ9ULJ8 1098 aa22.52■■□□□ 1.2
HMGB3P22-201ENST00000442010 NDUFB10O96000 172 aa22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 TFRCP02786 760 aaKnown RBP22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 NMIQ13287 307 aaPredicted RBP22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 REPS2Q8NFH8 660 aa22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 NPLOC4Q8TAT6 608 aa22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 SYNPO2Q9UMS6 1093 aa22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 IVNS1ABPQ9Y6Y0 642 aa22.51■■□□□ 1.19
HMGB3P22-201ENST00000442010 TRIM6-TRIM34B2RNG4 842 aa22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 STRNO43815 780 aa22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 CTDSPL2Q05D32 466 aa22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 FAM47AQ5JRC9 791 aa22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 ZNF589Q86UQ0 364 aaPredicted RBP22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 NUP88Q99567 741 aaPredicted RBP22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 INCENPQ9NQS7 918 aa22.5■■□□□ 1.19
HMGB3P22-201ENST00000442010 VWA5AO00534 786 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 TTLL1O95922 423 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 FGRP09769 529 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 TSPY3P0CV98 308 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 TSPY8P0CW00 308 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 MNX1P50219 401 aaPredicted RBP22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 TFAP4Q01664 338 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 RILPL2Q969X0 211 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 MROH8Q9H579 483 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 ZNF214Q9UL59 606 aaPredicted RBP22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 OGDHLQ9ULD0 1010 aa22.49■■□□□ 1.19
HMGB3P22-201ENST00000442010 RAD21O60216 631 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 FGAP02671 866 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 HSPD1P10809 573 aaKnown RBP22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 SDSP20132 328 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 ADORA2AP29274 412 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 CCND3P30281 292 aaPredicted RBP22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 PLS1Q14651 629 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 RIOX2Q8IUF8 465 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 ANKLE1Q8NAG6 615 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 GMCL1P1Q8NEA9 526 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 ZMYM6O95789 1325 aa22.48■■□□□ 1.19
HMGB3P22-201ENST00000442010 LAMA4Q16363 1823 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 COBLO75128 1261 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 SLC25A27O95847 323 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 LHX8Q68G74 356 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 NCAPG2Q86XI2 1143 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 ABRAQ8N0Z2 381 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 DIS3LQ8TF46 1054 aaKnown RBP22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 SLF1Q9BQI6 1058 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 IL17RBQ9NRM6 502 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 CCDC171Q6TFL3 1326 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 SMCHD1A6NHR9 2005 aa22.47■■□□□ 1.19
HMGB3P22-201ENST00000442010 ORC4O43929 436 aa22.46■■□□□ 1.19
HMGB3P22-201ENST00000442010 LRRC47Q8N1G4 583 aaKnown RBP22.46■■□□□ 1.19
HMGB3P22-201ENST00000442010 PAWRQ96IZ0 340 aaKnown RBP22.46■■□□□ 1.19
HMGB3P22-201ENST00000442010 HTATIP2Q9BUP3 242 aa22.46■■□□□ 1.19
HMGB3P22-201ENST00000442010 PDE4AP27815 886 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 STAT3P40763 770 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 NOVP48745 357 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 IRX6P78412 446 aaPredicted RBP22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 MFSD14CQ5VZR4 134 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 OLFML2BQ68BL8 750 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 DPP9Q86TI2 863 aa22.45■■□□□ 1.18
HMGB3P22-201ENST00000442010 H0YGN5 161 aa22.44■■□□□ 1.18
HMGB3P22-201ENST00000442010 PRPF38AQ8NAV1 312 aaKnown RBP22.44■■□□□ 1.18
HMGB3P22-201ENST00000442010 DPF3Q92784 378 aa22.44■■□□□ 1.18
HMGB3P22-201ENST00000442010 TSPY2A6NKD2 308 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 ATP2A1O14983 1001 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 NMT2O60551 498 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 FCER1AP12319 257 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 CYP2C19P33261 490 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 SLFN13Q68D06 897 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 NECAB2Q7Z6G3 386 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 TRPV1Q8NER1 839 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 NBPF3Q9H094 633 aa22.43■■□□□ 1.18
HMGB3P22-201ENST00000442010 CYBAP13498 195 aa22.42■■□□□ 1.18
HMGB3P22-201ENST00000442010 FEM1BQ9UK73 627 aa22.42■■□□□ 1.18
HMGB3P22-201ENST00000442010 RANBP6O60518 1105 aaKnown RBP22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 BMP3P12645 472 aa22.41■■□□□ 1.18
HMGB3P22-201ENST00000442010 COPB2P35606 906 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms