RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PSMC1P62191 440 aaKnown RBP5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 B4GALNT3Q6L9W6 998 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 CYFIP1Q7L576 1253 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 C11orf96Q7Z7L8 435 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 SIAH1Q8IUQ4 282 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 ACSBG1Q96GR2 724 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 KIRREL1Q96J84 757 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 HSPA12BQ96MM6 686 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 KCNK12Q9HB15 430 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 CBX8Q9HC52 389 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 NLRP2Q9NX02 1062 aa5.78□□□□□ -1.48
HMGB3P9-201ENST00000441799 SMARCA4P51532 1647 aa5.77□□□□□ -1.48
HMGB3P9-201ENST00000441799 RSF1Q96T23 1441 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 GNAT3A8MTJ3 354 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 ENC1O14682 589 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 PPP1R12AO14974 1030 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 SLITRK5O94991 958 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 LETM1O95202 739 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 ZSCAN22P10073 491 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 C1QTNF12Q5T7M4 302 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 TMC7Q7Z402 723 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 ANKLE2Q86XL3 938 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 PPP1R16BQ96T49 567 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 GTPBP4Q9BZE4 634 aaKnown RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 RANBP17Q9H2T7 1088 aaKnown RBP5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 CEP83Q9Y592 693 aa5.77□□□□□ -1.49
HMGB3P9-201ENST00000441799 ZNF608Q9ULD9 1512 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 TRIM37O94972 964 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 GDNFP39905 211 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 HSP90AB2PQ58FF8 381 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 TMEM67Q5HYA8 995 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 DIEXFQ68CQ4 756 aaKnown RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 LILRA6Q6PI73 481 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 PCGF5Q86SE9 256 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 ZSCAN18Q8TBC5 510 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 MYCBPQ99417 103 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 CCDC94Q9BW85 323 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 TMX4Q9H1E5 349 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 RSPH9Q9H1X1 276 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 PRDM5Q9NQX1 630 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 CWC25Q9NXE8 425 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 WWC3Q9ULE0 1092 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 MAPK8IP1Q9UQF2 711 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 SBNO2Q9Y2G9 1366 aa5.76□□□□□ -1.49
HMGB3P9-201ENST00000441799 FLT3P36888 993 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 SLBPQ14493 270 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 DSC3Q14574 896 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 SF3A1Q15459 793 aaKnown RBP5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 CCDC184Q52MB2 194 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 HSP90B2PQ58FF3 399 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 MPZL3Q6UWV2 235 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 CDC37L1Q7L3B6 337 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 MTERF4Q7Z6M4 381 aaKnown RBP5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 RIN3Q8TB24 985 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 FOXQ1Q9C009 403 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 FBRSQ9HAH7 460 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 PUF60Q9UHX1 559 aaKnown RBP5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 ST14Q9Y5Y6 855 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 FANCD2Q9BXW9 1451 aa5.75□□□□□ -1.49
HMGB3P9-201ENST00000441799 URB2Q14146 1524 aaKnown RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 LRIG2O94898 1065 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 CT47B1P0C2W7 299 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 ZC3H6P61129 1189 aaKnown RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 IGBP1P78318 339 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 PTPN11Q06124 597 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 INPP5AQ14642 412 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 CDKAL1Q5VV42 579 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 TPTE2Q6XPS3 522 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 C22orf34Q6ZV56 151 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 TTLL10Q6ZVT0 673 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 NPAS4Q8IUM7 802 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 DIRC2Q96SL1 478 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 ARPC5LQ9BPX5 153 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 SUDS3Q9H7L9 328 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 STK26Q9P289 416 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 CHPF2Q9P2E5 772 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 PPP1R1BQ9UD71 204 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 PCDHA4Q9UN74 947 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 PEG3Q9GZU2 1588 aa5.74□□□□□ -1.49
HMGB3P9-201ENST00000441799 RAD54L2Q9Y4B4 1467 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 CTAGE5O15320 804 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 XPCQ01831 940 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 DPH6Q7L8W6 267 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 C1orf131Q8NDD1 294 aaKnown RBP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 ZNF507Q8TCN5 953 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 INO80BQ9C086 356 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 TSPYL1Q9H0U9 437 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 NSUN3Q9H649 340 aaKnown RBP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 CAPN6Q9Y6Q1 641 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 NCANO14594 1321 aa5.73□□□□□ -1.49
HMGB3P9-201ENST00000441799 PNMA6FA0A0J9YX94 578 aa5.72□□□□□ -1.49
HMGB3P9-201ENST00000441799 KLHL33A6NCF5 533 aa5.72□□□□□ -1.49
HMGB3P9-201ENST00000441799 FAM155AB1AL88 458 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms