RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TXLNAP40222 546 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 AFMP43652 599 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 GTF2IP78347 998 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 GALNT17Q6IS24 598 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 USP49Q70CQ1 688 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 HEATR3Q7Z4Q2 680 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 DAGLBQ8NCG7 672 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 NEDD1Q8NHV4 660 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 ENOX1Q8TC92 643 aaKnown RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-218ENST00000439806 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
CPNE1-218ENST00000439806 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-218ENST00000439806 RRP9O43818 475 aaKnown RBP11.86□□□□□ -0.51
CPNE1-218ENST00000439806 TOP1P11387 765 aaKnown RBP11.86□□□□□ -0.51
CPNE1-218ENST00000439806 ATP1A3P13637 1013 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 NPR1P16066 1061 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 RHBDL3P58872 404 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 CT47A1Q5JQC4 288 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-218ENST00000439806 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
CPNE1-218ENST00000439806 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 DAGLAQ9Y4D2 1042 aa11.86□□□□□ -0.51
CPNE1-218ENST00000439806 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 A0A087X0B3 334 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 KLRF2D3W0D1 207 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 STXBP3O00186 592 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 BMP6P22004 513 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.516e-10■■■□□ 14.7
CPNE1-218ENST00000439806 NAPAP54920 295 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 PTPN14Q15678 1187 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 SOGA3Q5TF21 947 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 CEP135Q66GS9 1140 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 ARL6IP4Q66PJ3 421 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 TRMT44Q8IYL2 757 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 NLGN1Q8N2Q7 840 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 IQUBQ8NA54 791 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 DPF2Q92785 391 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 MAP7D2Q96T17 732 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 ZC3H12CQ9C0D7 883 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 HSD3B7Q9H2F3 369 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
CPNE1-218ENST00000439806 NFE2L3Q9Y4A8 694 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 MYH4Q9Y623 1939 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
CPNE1-218ENST00000439806 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 CCP110O43303 1012 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 ALDH1B1P30837 517 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PDE6BP35913 854 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 DPYDQ12882 1025 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PICALMQ13492 652 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 KRT25Q7Z3Z0 450 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
CPNE1-218ENST00000439806 CCDC112Q8NEF3 446 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 RASGRP4Q8TDF6 673 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 GSDMAQ96QA5 445 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 C6orf50Q9HD87 102 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 BARHL2Q9NY43 387 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PAXBP1Q9Y5B6 917 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
CPNE1-218ENST00000439806 PLIN4Q96Q06 1357 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 KCNJ6P48051 423 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.527e-7■■■□□ 18.6
CPNE1-218ENST00000439806 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-218ENST00000439806 MTERF4Q7Z6M4 381 aaKnown RBP11.83□□□□□ -0.52
CPNE1-218ENST00000439806 FLAD1Q8NFF5 587 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 RASSF8Q8NHQ8 419 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 SPATA20Q8TB22 786 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 ZNF592Q92610 1267 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 KCND1Q9NSA2 647 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 RMND1Q9NWS8 449 aa11.83□□□□□ -0.52
CPNE1-218ENST00000439806 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.52
CPNE1-218ENST00000439806 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
CPNE1-218ENST00000439806 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-218ENST00000439806 USP27XA6NNY8 438 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 TMEM232C9JQI7 657 aa11.82□□□□□ -0.52
CPNE1-218ENST00000439806 M0R2N6 131 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms