RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
RFTN1-203ENST00000432519 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
RFTN1-203ENST00000432519 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
RFTN1-203ENST00000432519 PAGE5Q96GU1 130 aa16.73■□□□□ 0.27
RFTN1-203ENST00000432519 MTRQ99707 1265 aa16.73■□□□□ 0.27
RFTN1-203ENST00000432519 TCP11L1Q9NUJ3 509 aa16.73■□□□□ 0.27
RFTN1-203ENST00000432519 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 M0R2N6 131 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 COBLO75128 1261 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 SCNN1DP51172 638 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 UBASH3AP57075 661 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 ELOA2Q8IYF1 753 aaPredicted RBP16.72■□□□□ 0.27
RFTN1-203ENST00000432519 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 FAM163AQ96GL9 167 aaPredicted RBP16.72■□□□□ 0.27
RFTN1-203ENST00000432519 ATP6V0A2Q9Y487 856 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 RIOK3O14730 519 aaKnown RBP16.72■□□□□ 0.27
RFTN1-203ENST00000432519 SH3RF1Q7Z6J0 888 aa16.72■□□□□ 0.27
RFTN1-203ENST00000432519 SAMSN1Q9NSI8 373 aaKnown RBP16.72■□□□□ 0.27
RFTN1-203ENST00000432519 KLRF2D3W0D1 207 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 SERPINC1P01008 464 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 EIF6P56537 245 aaKnown RBP16.71■□□□□ 0.27
RFTN1-203ENST00000432519 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 FERMT2Q96AC1 680 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
RFTN1-203ENST00000432519 STXBP3O00186 592 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.26
RFTN1-203ENST00000432519 CFAP100Q494V2 611 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 UBE2Q2Q8WVN8 375 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 PRIMPOLQ96LW4 560 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 PCDHA6Q9UN73 950 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 PCDHA4Q9UN74 947 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 PCDHA8Q9Y5H6 950 aa16.71■□□□□ 0.26
RFTN1-203ENST00000432519 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 E2F4Q16254 413 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 INF2Q27J81 1249 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 UBA5Q9GZZ9 404 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 MMP10P09238 476 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 TNNT1P13805 278 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 STX17P56962 302 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 TPM4P67936 248 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 DPYDQ12882 1025 aa16.7■□□□□ 0.26
RFTN1-203ENST00000432519 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
RFTN1-203ENST00000432519 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 APBA3O96018 575 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF18P17022 549 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
RFTN1-203ENST00000432519 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 BARHL2Q9NY43 387 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 IMPACTQ9P2X3 320 aa16.69■□□□□ 0.26
RFTN1-203ENST00000432519 HOOK1Q9UJC3 728 aaKnown RBP16.69■□□□□ 0.26
RFTN1-203ENST00000432519 TTF2Q9UNY4 1162 aaKnown RBP16.69■□□□□ 0.26
RFTN1-203ENST00000432519 ZC3H12CQ9C0D7 883 aaKnown RBP16.68■□□□□ 0.26
RFTN1-203ENST00000432519 COL11A2P13942 1736 aaPredicted RBP16.68■□□□□ 0.26
RFTN1-203ENST00000432519 DYNC1I1O14576 645 aa16.68■□□□□ 0.26
RFTN1-203ENST00000432519 AKR1B1P15121 316 aa16.68■□□□□ 0.26
RFTN1-203ENST00000432519 PDXDC2PQ6P474 469 aa16.68■□□□□ 0.26
RFTN1-203ENST00000432519 LRRC47Q8N1G4 583 aaKnown RBP16.68■□□□□ 0.26
RFTN1-203ENST00000432519 MLKLQ8NB16 471 aa16.68■□□□□ 0.26
RFTN1-203ENST00000432519 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
RFTN1-203ENST00000432519 NEMFO60524 1076 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 CALML3P27482 149 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 GSDMDP57764 484 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 NFIAQ12857 509 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 CUL4BQ13620 913 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 KARSQ15046 597 aaKnown RBP16.67■□□□□ 0.26
RFTN1-203ENST00000432519 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 LRRC15Q8TF66 581 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 DBNDD1Q9H9R9 158 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 IGSF3O75054 1194 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 BMP15O95972 392 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 PLCG2P16885 1265 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 TRAPPC10P48553 1259 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 GABPAQ06546 454 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 SHROOM1Q2M3G4 852 aaPredicted RBP16.67■□□□□ 0.26
RFTN1-203ENST00000432519 KANK3Q6NY19 840 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 VSTM4Q8IW00 320 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF592Q92610 1267 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 PIGSQ96S52 555 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
RFTN1-203ENST00000432519 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
RFTN1-203ENST00000432519 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
RFTN1-203ENST00000432519 CACNB3P54284 484 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
RFTN1-203ENST00000432519 NYAP1Q6ZVC0 841 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
RFTN1-203ENST00000432519 ENOX1Q8TC92 643 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms