RNA–Protein interactions for RNA: ENST00000429789.6

CHID1-202, Transcript of chitinase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CHID1, Length 1,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-202ENST00000429789 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
CHID1-202ENST00000429789 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 SMIM22K7EJ46 135 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 EEF2P13639 858 aaKnown RBP16.73■□□□□ 0.27
CHID1-202ENST00000429789 ADCYAP1R1P41586 468 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 SNX17Q15036 470 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 LRRC41Q15345 812 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 MIER1Q8N108 512 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 HAUS7Q99871 368 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 PRDM5Q9NQX1 630 aaPredicted RBP16.73■□□□□ 0.27
CHID1-202ENST00000429789 ADAMTS5Q9UNA0 930 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 SMCHD1A6NHR9 2005 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 CUL9Q8IWT3 2517 aa16.73■□□□□ 0.27
CHID1-202ENST00000429789 MYH7P12883 1935 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 CHGBP05060 677 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 UBE3CQ15386 1083 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 TRIM60Q495X7 471 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 FAM47AQ5JRC9 791 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 FERMT2Q96AC1 680 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 FAM161BQ96MY7 647 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 GUCD1Q96NT3 240 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 MMP19Q99542 508 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 FBXO28Q9NVF7 368 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 NRBP1Q9UHY1 535 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
CHID1-202ENST00000429789 STAT3P40763 770 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 SHHQ15465 462 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 ZNF697Q5TEC3 545 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 C1orf53Q5VUE5 145 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 RIOX2Q8IUF8 465 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 BADQ92934 168 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 GOPCQ9HD26 462 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
CHID1-202ENST00000429789 VWA5AO00534 786 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 PGK2P07205 417 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 RARBP10826 455 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 KCTD2Q14681 263 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 TINF2Q9BSI4 451 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
CHID1-202ENST00000429789 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 PPP1R9AQ9ULJ8 1098 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
CHID1-202ENST00000429789 UNC80Q8N2C7 3258 aa16.7■□□□□ 0.26
CHID1-202ENST00000429789 TRIM43BA6NCK2 446 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 RAD21O60216 631 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 TLE2Q04725 743 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 ZNF792Q3KQV3 632 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 C9orf50Q5SZB4 431 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 FAM83BQ5T0W9 1011 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 RNF180Q86T96 592 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 TRIM43Q96BQ3 446 aaPredicted RBP16.69■□□□□ 0.26
CHID1-202ENST00000429789 PUS7LQ9H0K6 701 aaKnown RBP16.69■□□□□ 0.26
CHID1-202ENST00000429789 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
CHID1-202ENST00000429789 PHF24Q9UPV7 400 aa16.69■□□□□ 0.26
CHID1-202ENST00000429789 COPB2P35606 906 aa16.68■□□□□ 0.26
CHID1-202ENST00000429789 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■■■■■ 36.3
CHID1-202ENST00000429789 REPS2Q8NFH8 660 aa16.68■□□□□ 0.26
CHID1-202ENST00000429789 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
CHID1-202ENST00000429789 PGK1P00558 417 aa16.67■□□□□ 0.26
CHID1-202ENST00000429789 TAL1P17542 331 aaPredicted RBP16.67■□□□□ 0.26
CHID1-202ENST00000429789 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHID1-202ENST00000429789 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
CHID1-202ENST00000429789 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
CHID1-202ENST00000429789 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 CLTBP09497 229 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 ZNF865P0CJ78 1059 aaPredicted RBP16.66■□□□□ 0.26
CHID1-202ENST00000429789 AKR1A1P14550 325 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 SBK1Q52WX2 424 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 STRBPQ96SI9 672 aaKnown RBP16.66■□□□□ 0.26
CHID1-202ENST00000429789 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
CHID1-202ENST00000429789 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
CHID1-202ENST00000429789 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
CHID1-202ENST00000429789 A0A1W2PQ45 241 aaPredicted RBP16.65■□□□□ 0.26
CHID1-202ENST00000429789 A0A1W2PQY0 241 aa16.65■□□□□ 0.26
CHID1-202ENST00000429789 SMARCA5O60264 1052 aaPredicted RBP16.65■□□□□ 0.26
CHID1-202ENST00000429789 SMAD3P84022 425 aaKnown RBP16.65■□□□□ 0.26
CHID1-202ENST00000429789 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
CHID1-202ENST00000429789 SLF1Q9BQI6 1058 aa16.65■□□□□ 0.26
CHID1-202ENST00000429789 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
CHID1-202ENST00000429789 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
CHID1-202ENST00000429789 MKNK2Q9HBH9 465 aa16.65■□□□□ 0.26
CHID1-202ENST00000429789 NYAP2Q9P242 653 aa16.65■□□□□ 0.26
CHID1-202ENST00000429789 GSG1L2A8MUP6 293 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 F5H6K3 240 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 RASA1P20936 1047 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 ITGB8P26012 769 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 KLRC3Q07444 240 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
CHID1-202ENST00000429789 SNRNP48Q6IEG0 339 aaKnown RBP16.64■□□□□ 0.25
CHID1-202ENST00000429789 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
CHID1-202ENST00000429789 STK11IPQ8N1F8 1099 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms