RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 STIM1Q13586 685 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 SMC1AQ14683 1233 aaKnown RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 NBPF5PQ86XG9 351 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 ATRIPQ8WXE1 791 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 JADE2Q9NQC1 790 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 MACROD2A1Z1Q3 448 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 PEX14O75381 377 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 ERLIN1O75477 346 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 ZMYND10O75800 440 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 PLCD1P51178 756 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 ZNF444Q8N0Y2 327 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 SLC35F6Q8N357 371 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CDK5RAP3Q96JB5 506 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 SRRTQ9BXP5 876 aaKnown RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 PARD6BQ9BYG5 372 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 FAM217BQ9NTX9 383 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 TUBE1Q9UJT0 475 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 FBXO2Q9UK22 296 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 GDAQ9Y2T3 454 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 MORC2Q9Y6X9 1032 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 CTAGE15A4D2H0 777 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CTAGE8P0CG41 777 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CHRNA5P30532 468 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 NTRK3Q16288 839 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 LETM2Q2VYF4 491 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 RBM26Q5T8P6 1007 aaKnown RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 CTAGE6Q86UF2 777 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CTAGE4Q8IX94 777 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 ENAHQ8N8S7 591 aaPredicted RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 CRNKL1Q9BZJ0 848 aaKnown RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 MRPL44Q9H9J2 332 aaKnown RBP9.08□□□□□ -0.96
HPS4-205ENST00000429411 TFR2Q9UP52 801 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
HPS4-205ENST00000429411 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 PP2D1A8MPX8 630 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 STX10O60499 249 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 EIF6P56537 245 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 MRPS25P82663 173 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 EVX2Q03828 476 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SYCP1Q15431 976 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 EARS2Q5JPH6 523 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 LEKR1Q6ZMV7 388 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 BPIFA3Q9BQP9 254 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 FOXP1Q9H334 677 aaPredicted RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 ZNF652Q9Y2D9 606 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 TRIM49BA6NDI0 452 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 EFCAB8A8MWE9 144 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 ASIC1P78348 528 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 TC2NQ8N9U0 490 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 NLGN2Q8NFZ4 835 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 PAGE5Q96GU1 130 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 ZNF446Q9NWS9 450 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SRPRBQ9Y5M8 271 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 COL14A1Q05707 1796 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 CEP350Q5VT06 3117 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 F8W031 263 aaPredicted RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 TSPY3P0CV98 308 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 TSPY8P0CW00 308 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 TFAP4Q01664 338 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 PAK1Q13153 545 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 CUL4BQ13620 913 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 INF2Q27J81 1249 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SOGA3Q5TF21 947 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SPATA1Q5VX52 437 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SPTY2D1Q68D10 685 aaPredicted RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 APBB1IPQ7Z5R6 666 aaPredicted RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 ADGRA1Q86SQ6 560 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SGMS1Q86VZ5 419 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 REXO1L1PQ8IX06 675 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 ENOX1Q8TC92 643 aaKnown RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 CTAGE1Q96RT6 745 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 HPSEQ9Y251 543 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
HPS4-205ENST00000429411 TRPM3Q9HCF6 1732 aaPredicted RBP9.07□□□□□ -0.96
HPS4-205ENST00000429411 PHLPP2Q6ZVD8 1323 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 ALS2Q96Q42 1657 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 CCDC122Q5T0U0 273 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 DTHD1Q6ZMT9 781 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 CNGA4Q8IV77 575 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 DYNLL2Q96FJ2 89 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 GPR101Q96P66 508 aaPredicted RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 SUGCTQ9HAC7 445 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 SLIT3O75094 1523 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 EIF3JO75822 258 aaKnown RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 PRDX5P30044 214 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 ARID5AQ03989 594 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
HPS4-205ENST00000429411 MORC3Q14149 939 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 ERFEQ4G0M1 354 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 NCAPH2Q6IBW4 605 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 ARHGAP27Q6ZUM4 889 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 CALCOCO1Q9P1Z2 691 aa9.06□□□□□ -0.96
HPS4-205ENST00000429411 LUC7L2Q9Y383 392 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms