RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	PRMT2	P55345	433 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	TRDN	Q13061	729 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	DGKH	Q86XP1	1220 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	MB21D1	Q8N884	522 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	ANKS1A	Q92625	1134 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	TMEM47	Q9BQJ4	181 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681	TAF6L	Q9Y6J9	622 aa		27.66	■■■□□ 2.02
PDGFA-205	ENST00000426681		A0A0G2JMZ2	1700 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681		E7EWF7	191 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681	PEX10	O60683	326 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681		Q3C1V9	767 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681	PAGR1	Q9BTK6	254 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681	FBXO28	Q9NVF7	368 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681	PPP1R9A	Q9ULJ8	1098 aa		27.65	■■■□□ 2.02
PDGFA-205	ENST00000426681	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	27.64	■■■□□ 2.02
PDGFA-205	ENST00000426681	ZKSCAN3	Q9BRR0	538 aa		27.64	■■■□□ 2.02
PDGFA-205	ENST00000426681	BTBD7	Q9P203	1132 aa		27.64	■■■□□ 2.02
PDGFA-205	ENST00000426681	SRRD	Q9UH36	339 aa		27.64	■■■□□ 2.02
PDGFA-205	ENST00000426681	SLC27A2	O14975	620 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	BMP3	P12645	472 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	CREB3L3	Q68CJ9	461 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	STOX1	Q6ZVD7	989 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	NCOA7	Q8NI08	942 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	ATG4C	Q96DT6	458 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	SLF1	Q9BQI6	1058 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	FEM1B	Q9UK73	627 aa		27.63	■■■□□ 2.01
PDGFA-205	ENST00000426681	TNPO2	O14787	897 aa	Known RBP	27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	ECM2	O94769	699 aa	Predicted RBP	27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	MCC	P23508	829 aa		27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	CCNA1	P78396	465 aa		27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	PRPF38A	Q8NAV1	312 aa	Known RBP	27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	ABHD8	Q96I13	439 aa		27.62	■■■□□ 2.01
PDGFA-205	ENST00000426681	MAPK4	P31152	587 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	SLC1A4	P43007	532 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	CYB5R4	Q7L1T6	521 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	RALYL	Q86SE5	291 aa	Known RBP	27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	ENAH	Q8N8S7	591 aa	Predicted RBP	27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	DCAF4	Q8WV16	495 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	COA7	Q96BR5	231 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	UBAC1	Q9BSL1	405 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	DOCK3	Q8IZD9	2030 aa		27.61	■■■□□ 2.01
PDGFA-205	ENST00000426681	VWA5A	O00534	786 aa		27.6	■■■□□ 2.01
PDGFA-205	ENST00000426681	PLA2G6	O60733	806 aa		27.6	■■■□□ 2.01
PDGFA-205	ENST00000426681	RNF20	Q5VTR2	975 aa		27.6	■■■□□ 2.01
PDGFA-205	ENST00000426681	PORCN	Q9H237	461 aa		27.6	■■■□□ 2.01
PDGFA-205	ENST00000426681	HPS5	Q9UPZ3	1129 aa		27.6	■■■□□ 2.01
PDGFA-205	ENST00000426681	TNKS	O95271	1327 aa		27.59	■■■□□ 2.01
PDGFA-205	ENST00000426681	REC8	O95072	547 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	PRKCZ	Q05513	592 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	SEC23A	Q15436	765 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	FAM160B2	Q86V87	743 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	CHURC1	Q8WUH1	139 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	SPATC1L	Q9H0A9	340 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	PTCH2	Q9Y6C5	1203 aa		27.58	■■■□□ 2.01
PDGFA-205	ENST00000426681	TMEM232	C9JQI7	657 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	SNHG28	P0DPA3	235 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	STAT2	P52630	851 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	TMEM132B	Q14DG7	1078 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	TSGA10IP	Q3SY00	556 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.57	■■■□□ 2
PDGFA-205	ENST00000426681	CCAR1	Q8IX12	1150 aa	Known RBP	27.57	■■■□□ 2
PDGFA-205	ENST00000426681	SHCBP1	Q8NEM2	672 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	REPS2	Q8NFH8	660 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.57	■■■□□ 2
PDGFA-205	ENST00000426681	GJD2	Q9UKL4	321 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	GABRQ	Q9UN88	632 aa		27.57	■■■□□ 2
PDGFA-205	ENST00000426681	COL11A1	P12107	1806 aa	Predicted RBP	27.57	■■■□□ 2
PDGFA-205	ENST00000426681	EPB41L2	O43491	1005 aa	Known RBP	27.56	■■■□□ 2
PDGFA-205	ENST00000426681	PDHB	P11177	359 aa		27.56	■■■□□ 2
PDGFA-205	ENST00000426681	FLT3LG	P49771	235 aa		27.56	■■■□□ 2
PDGFA-205	ENST00000426681	KCTD1	Q719H9	257 aa		27.56	■■■□□ 2
PDGFA-205	ENST00000426681	KAT14	Q9H8E8	782 aa		27.56	■■■□□ 2
PDGFA-205	ENST00000426681	FDX1	P10109	184 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	IRF5	Q13568	498 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	RASGRP2	Q7LDG7	609 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	GPR142	Q7Z601	462 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	PLEKHH3	Q7Z736	793 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	PNMA1	Q8ND90	353 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	KIFC2	Q96AC6	838 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	MTA3	Q9BTC8	594 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	ZNF214	Q9UL59	606 aa	Predicted RBP	27.55	■■■□□ 2
PDGFA-205	ENST00000426681	MTMR7	Q9Y216	660 aa		27.55	■■■□□ 2
PDGFA-205	ENST00000426681	ATP2A1	O14983	1001 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	ANTXR2	P58335	489 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	IFIT1B	Q5T764	474 aa	Known RBP	27.54	■■■□□ 2
PDGFA-205	ENST00000426681	BTNL9	Q6UXG8	535 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	RAET1E	Q8TD07	263 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	KCNB2	Q92953	911 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	CHMP4C	Q96CF2	233 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	SLC38A10	Q9HBR0	1119 aa		27.54	■■■□□ 2
PDGFA-205	ENST00000426681	ISY1	Q9ULR0	285 aa	Known RBP	27.54	■■■□□ 2
PDGFA-205	ENST00000426681	PLXNB2	O15031	1838 aa		27.53	■■■□□ 2
PDGFA-205	ENST00000426681	IFIT3	O14879	490 aa	Known RBP	27.53	■■■□□ 2
PDGFA-205	ENST00000426681	ZBED4	O75132	1171 aa		27.53	■■■□□ 2
PDGFA-205	ENST00000426681	STAT3	P40763	770 aa		27.53	■■■□□ 2
PDGFA-205	ENST00000426681	ZNF543	Q08ER8	600 aa		27.53	■■■□□ 2
PDGFA-205	ENST00000426681	PLS1	Q14651	629 aa		27.53	■■■□□ 2
PDGFA-205	ENST00000426681	SART3	Q15020	963 aa	Known RBP	27.53	■■■□□ 2
PDGFA-205	ENST00000426681	CCDC96	Q2M329	555 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms