RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RIOX1Q9H6W3 641 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 BRMS1Q9HCU9 246 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
ACTB-204ENST00000425660 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
ACTB-204ENST00000425660 NBPF9Q3BBW0 867 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 MORC2Q9Y6X9 1032 aaPredicted RBP17.49■□□□□ 0.39
ACTB-204ENST00000425660 CALML3P27482 149 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 MAP3K10Q02779 954 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 ZNF543Q08ER8 600 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 ABCB5Q2M3G0 1257 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 GPATCH4Q5T3I0 446 aaKnown RBP17.49■□□□□ 0.39
ACTB-204ENST00000425660 SIAH1Q8IUQ4 282 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 DACT1Q9NYF0 836 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 SYNPO2Q9UMS6 1093 aa17.49■□□□□ 0.39
ACTB-204ENST00000425660 SHTN1A0MZ66 631 aa17.48■□□□□ 0.39
ACTB-204ENST00000425660 NR1I2O75469 434 aa17.48■□□□□ 0.39
ACTB-204ENST00000425660 EEF2P13639 858 aaKnown RBP17.48■□□□□ 0.39
ACTB-204ENST00000425660 GMPSP49915 693 aaPredicted RBP17.48■□□□□ 0.39
ACTB-204ENST00000425660 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
ACTB-204ENST00000425660 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
ACTB-204ENST00000425660 GRPEL1Q9HAV7 217 aa17.48■□□□□ 0.39
ACTB-204ENST00000425660 VEZTQ9HBM0 779 aa17.48■□□□□ 0.39
ACTB-204ENST00000425660 NLRP5P59047 1200 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 ICA1Q05084 483 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 RRP1BQ14684 758 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 SEPT2Q15019 361 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 TYW1BQ6NUM6 668 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 JMYQ8N9B5 988 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 DAGLBQ8NCG7 672 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 ENGASEQ8NFI3 743 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■□□□ 13.5
ACTB-204ENST00000425660 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 M0R2N6 131 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 STXBP3O00186 592 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 EGFRP00533 1210 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 SNW1Q13573 536 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 RBM26Q5T8P6 1007 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 RBM43Q6ZSC3 357 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 CCAR1Q8IX12 1150 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 MICALL2Q8IY33 904 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 PIBF1Q8WXW3 757 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
ACTB-204ENST00000425660 RRP36Q96EU6 259 aaKnown RBP17.47■□□□□ 0.39
ACTB-204ENST00000425660 CABP5Q9NP86 173 aa17.47■□□□□ 0.39
ACTB-204ENST00000425660 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 GDF11O95390 407 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 LMNB1P20700 586 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 JAG1P78504 1218 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 FAM160A1Q05DH4 1040 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 TNFAIP1Q13829 316 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
ACTB-204ENST00000425660 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
ACTB-204ENST00000425660 GMCL1P1Q8NEA9 526 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 MRPS27Q92552 414 aaKnown RBP17.46■□□□□ 0.39
ACTB-204ENST00000425660 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 CPVLQ9H3G5 476 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 GOLPH3LQ9H4A5 285 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
ACTB-204ENST00000425660 FRMPD2Q68DX3 1309 aaPredicted RBP17.45■□□□□ 0.38
ACTB-204ENST00000425660 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 GH2P01242 217 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.384e-22■□□□□ 8.8
ACTB-204ENST00000425660 TRAPPC10P48553 1259 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 TNNI2P48788 182 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 DCAF4Q8WV16 495 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 ZMYND12Q9H0C1 365 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
ACTB-204ENST00000425660 SEC63Q9UGP8 760 aaKnown RBP17.45■□□□□ 0.38
ACTB-204ENST00000425660 CNOT7Q9UIV1 285 aaKnown RBP17.45■□□□□ 0.38
ACTB-204ENST00000425660 MYH4Q9Y623 1939 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 CMA1P23946 247 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 CCDC73Q6ZRK6 1079 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 CDAN1Q8IWY9 1227 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 BLIDQ8IZY5 108 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
ACTB-204ENST00000425660 MTMR8Q96EF0 704 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 UBA5Q9GZZ9 404 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 FAM237AA0A1B0GTK4 181 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 ATP2B2Q01814 1243 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 FMR1NBQ8N0W7 255 aaPredicted RBP17.44■□□□□ 0.38
ACTB-204ENST00000425660 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 GMCL1Q96IK5 515 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 PIGSQ96S52 555 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 GJA3Q9Y6H8 435 aa17.44■□□□□ 0.38
ACTB-204ENST00000425660 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
ACTB-204ENST00000425660 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
ACTB-204ENST00000425660 MARCKSP29966 332 aaPredicted RBP17.43■□□□□ 0.38
ACTB-204ENST00000425660 RASA3Q14644 834 aa17.43■□□□□ 0.38
ACTB-204ENST00000425660 TEPSINQ96N21 525 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms