RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 NRBP1Q9UHY1 535 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
UPF3AP3-201ENST00000420996 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 MYCNP04198 464 aaPredicted RBP20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 ADCYAP1R1P41586 468 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 UBE3CQ15386 1083 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 HAUS7Q99871 368 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
UPF3AP3-201ENST00000420996 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 PLXNA1Q9UIW2 1896 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 SMIM22K7EJ46 135 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 EEF2P13639 858 aaKnown RBP20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 TRIM60Q495X7 471 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 C1orf53Q5VUE5 145 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 RIOX2Q8IUF8 465 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 GUCD1Q96NT3 240 aa20.29■□□□□ 0.84
UPF3AP3-201ENST00000420996 A0A0C4DFX4 3053 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 SHHQ15465 462 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 ZNF697Q5TEC3 545 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 MIER1Q8N108 512 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 FERMT2Q96AC1 680 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 MMP19Q99542 508 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 PRDM5Q9NQX1 630 aaPredicted RBP20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 FBXO28Q9NVF7 368 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 COG6Q9Y2V7 657 aa20.28■□□□□ 0.84
UPF3AP3-201ENST00000420996 VWA5AO00534 786 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 CHGBP05060 677 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 STAT3P40763 770 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 CTR9Q6PD62 1173 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 BADQ92934 168 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 FAM161BQ96MY7 647 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 TINF2Q9BSI4 451 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 CHMP4BQ9H444 224 aaKnown RBP20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 GOPCQ9HD26 462 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 PDLIM7Q9NR12 457 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 PPP1R9AQ9ULJ8 1098 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 SLC4A4Q9Y6R1 1079 aa20.27■□□□□ 0.84
UPF3AP3-201ENST00000420996 RARBP10826 455 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 COPB2P35606 906 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 KCTD2Q14681 263 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 ZNF792Q3KQV3 632 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 C9orf50Q5SZB4 431 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 XPNPEP3Q9NQH7 507 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 PHF24Q9UPV7 400 aa20.26■□□□□ 0.83
UPF3AP3-201ENST00000420996 TRIM43BA6NCK2 446 aa20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 PGK2P07205 417 aa20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 SH3RF1Q7Z6J0 888 aa20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 TRIM43Q96BQ3 446 aaPredicted RBP20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 ZNF214Q9UL59 606 aaPredicted RBP20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
UPF3AP3-201ENST00000420996 GREB1LQ9C091 1923 aaPredicted RBP20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 TLE2Q04725 743 aa20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 FAM83BQ5T0W9 1011 aa20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 RNF180Q86T96 592 aa20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 REPS2Q8NFH8 660 aa20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 PUS7LQ9H0K6 701 aaKnown RBP20.24■□□□□ 0.83
UPF3AP3-201ENST00000420996 ROBO3Q96MS0 1386 aa20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 RAD21O60216 631 aa20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 PGK1P00558 417 aa20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 ZNF865P0CJ78 1059 aaPredicted RBP20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 ARPP21Q9UBL0 812 aaPredicted RBP20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 LAMA2P24043 3122 aaKnown RBP20.23■□□□□ 0.83
UPF3AP3-201ENST00000420996 AKR1A1P14550 325 aa20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 TAL1P17542 331 aaPredicted RBP20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 SMAD3P84022 425 aaKnown RBP20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 STRBPQ96SI9 672 aaKnown RBP20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 LRRCC1Q9C099 1032 aa20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 SEMA6BQ9H3T3 888 aa20.22■□□□□ 0.83
UPF3AP3-201ENST00000420996 CLTBP09497 229 aa20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 MSL3Q8N5Y2 521 aaKnown RBP20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 CDX2Q99626 313 aaPredicted RBP20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 SLF1Q9BQI6 1058 aa20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 TSEN34Q9BSV6 310 aaKnown RBP20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 COL25A1Q9BXS0 654 aaPredicted RBP20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 NYAP2Q9P242 653 aa20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 CNPY2Q9Y2B0 182 aa20.21■□□□□ 0.83
UPF3AP3-201ENST00000420996 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 KIAA0355O15063 1070 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 RASA1P20936 1047 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 TEX13BQ9BXU2 312 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 MKNK2Q9HBH9 465 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 CUL9Q8IWT3 2517 aa20.2■□□□□ 0.82
UPF3AP3-201ENST00000420996 F5H6K3 240 aa20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 ADAMTS4O75173 837 aa20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 ITGB8P26012 769 aa20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 KLRC3Q07444 240 aa20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 SNRNP48Q6IEG0 339 aaKnown RBP20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 PRPF38AQ8NAV1 312 aaKnown RBP20.19■□□□□ 0.82
UPF3AP3-201ENST00000420996 DDX11Q96FC9 970 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms