RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 FARP2O94887 1054 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-211ENST00000420363 TFRCP02786 760 aaKnown RBP25.31■■□□□ 1.64
CPNE1-211ENST00000420363 CHMLP26374 656 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 MAPK4P31152 587 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 CCNA1P78396 465 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 UBE2Q1Q7Z7E8 422 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 MB21D1Q8N884 522 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 STAG1Q8WVM7 1258 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 CCDC136Q96JN2 1154 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 PAGR1Q9BTK6 254 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 RNF41Q9H4P4 317 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-211ENST00000420363 TACC3Q9Y6A5 838 aa25.31■■□□□ 1.64
CPNE1-211ENST00000420363 FAM47AQ5JRC9 791 aa25.3■■□□□ 1.64
CPNE1-211ENST00000420363 GMCL1P1Q8NEA9 526 aa25.3■■□□□ 1.64
CPNE1-211ENST00000420363 IL25Q9H293 177 aa25.3■■□□□ 1.64
CPNE1-211ENST00000420363 FLOT1O75955 427 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 DSG3P32926 999 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 AKNAD1Q5T1N1 836 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 CHRDL2Q6WN34 429 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 DEFB118Q96PH6 123 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 NBPF3Q9H094 633 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 CLIP2Q9UDT6 1046 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 CTNNA3Q9UI47 895 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 NR2E3Q9Y5X4 410 aa25.29■■□□□ 1.64
CPNE1-211ENST00000420363 F5H6K3 240 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 RANBP6O60518 1105 aaKnown RBP25.28■■□□□ 1.64
CPNE1-211ENST00000420363 NDUFB10O96000 172 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 NOVP48745 357 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 HAND2P61296 217 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 KLRC3Q07444 240 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 BMP2KLQ5H9B9 411 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 TBC1D10CQ8IV04 446 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 SOCS4Q8WXH5 440 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 ZNF236Q9UL36 1845 aa25.28■■□□□ 1.64
CPNE1-211ENST00000420363 ZNF213O14771 459 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 Q3C1V9 767 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 MFSD6Q6ZSS7 791 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 PORCNQ9H237 461 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 INCENPQ9NQS7 918 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 IL17RBQ9NRM6 502 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 TCP11L1Q9NUJ3 509 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 BTBD7Q9P203 1132 aa25.27■■□□□ 1.64
CPNE1-211ENST00000420363 COL11A1P12107 1806 aaPredicted RBP25.27■■□□□ 1.64
CPNE1-211ENST00000420363 PEX10O60683 326 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 IMMTQ16891 758 aaKnown RBP25.26■■□□□ 1.63
CPNE1-211ENST00000420363 FAM83BQ5T0W9 1011 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 ERICH6BQ5W0A0 696 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 TOMM22Q9NS69 142 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 PPP1R9AQ9ULJ8 1098 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 ADAMTS5Q9UNA0 930 aa25.26■■□□□ 1.63
CPNE1-211ENST00000420363 SGSM2O43147 1006 aa25.25■■□□□ 1.63
CPNE1-211ENST00000420363 GPR142Q7Z601 462 aa25.25■■□□□ 1.63
CPNE1-211ENST00000420363 CCAR1Q8IX12 1150 aaKnown RBP25.25■■□□□ 1.63
CPNE1-211ENST00000420363 LRRC47Q8N1G4 583 aaKnown RBP25.25■■□□□ 1.63
CPNE1-211ENST00000420363 ATG4CQ96DT6 458 aa25.25■■□□□ 1.63
CPNE1-211ENST00000420363 PAK6Q9NQU5 681 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-211ENST00000420363 GJD2Q9UKL4 321 aa25.25■■□□□ 1.63
CPNE1-211ENST00000420363 NEDD4P46934 1319 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 RAD21O60216 631 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 RRP12Q5JTH9 1297 aaKnown RBP25.24■■□□□ 1.63
CPNE1-211ENST00000420363 PLEKHH3Q7Z736 793 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 SHCBP1Q8NEM2 672 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 SPATC1LQ9H0A9 340 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 STX8Q9UNK0 236 aa25.24■■□□□ 1.63
CPNE1-211ENST00000420363 ESR2Q92731 530 aa25.23■■□□□ 1.63
CPNE1-211ENST00000420363 GMCL1Q96IK5 515 aa25.23■■□□□ 1.63
CPNE1-211ENST00000420363 NUDT12Q9BQG2 462 aa25.23■■□□□ 1.63
CPNE1-211ENST00000420363 SLF1Q9BQI6 1058 aa25.23■■□□□ 1.63
CPNE1-211ENST00000420363 FBXO28Q9NVF7 368 aa25.23■■□□□ 1.63
CPNE1-211ENST00000420363 RBM27Q9P2N5 1060 aaKnown RBP25.23■■□□□ 1.63
CPNE1-211ENST00000420363 TRIOBPQ9H2D6 2365 aa25.22■■□□□ 1.63
CPNE1-211ENST00000420363 EVI5O60447 810 aa25.22■■□□□ 1.63
CPNE1-211ENST00000420363 HMGCRP04035 888 aa25.22■■□□□ 1.63
CPNE1-211ENST00000420363 SLFN13Q68D06 897 aa25.22■■□□□ 1.63
CPNE1-211ENST00000420363 NUP88Q99567 741 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-211ENST00000420363 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.22■■□□□ 1.636e-9■□□□□ 10.4
CPNE1-211ENST00000420363 VWA5AO00534 786 aa25.21■■□□□ 1.63
CPNE1-211ENST00000420363 NMT2O60551 498 aa25.21■■□□□ 1.63
CPNE1-211ENST00000420363 XRCC5P13010 732 aaKnown RBP25.21■■□□□ 1.63
CPNE1-211ENST00000420363 MORN1Q5T089 497 aa25.21■■□□□ 1.63
CPNE1-211ENST00000420363 USP6NLQ92738 828 aa25.21■■□□□ 1.63
CPNE1-211ENST00000420363 MOV10L1Q9BXT6 1211 aaKnown RBP25.21■■□□□ 1.63
CPNE1-211ENST00000420363 CRISPLD2Q9H0B8 497 aa25.21■■□□□ 1.63
CPNE1-211ENST00000420363 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
CPNE1-211ENST00000420363 PRPF38AQ8NAV1 312 aaKnown RBP25.2■■□□□ 1.62
CPNE1-211ENST00000420363 REPS2Q8NFH8 660 aa25.2■■□□□ 1.62
CPNE1-211ENST00000420363 PAWRQ96IZ0 340 aaKnown RBP25.2■■□□□ 1.62
CPNE1-211ENST00000420363 TTC14Q96N46 770 aa25.2■■□□□ 1.62
CPNE1-211ENST00000420363 CNNM2Q9H8M5 875 aa25.2■■□□□ 1.62
CPNE1-211ENST00000420363 FEM1BQ9UK73 627 aa25.2■■□□□ 1.62
CPNE1-211ENST00000420363 IVNS1ABPQ9Y6Y0 642 aa25.2■■□□□ 1.62
CPNE1-211ENST00000420363 U3KPZ7 1027 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-211ENST00000420363 SLC15A5A6NIM6 579 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 TOP1P11387 765 aaKnown RBP25.19■■□□□ 1.62
CPNE1-211ENST00000420363 BMP3P12645 472 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 COPB2P35606 906 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 RGS2P41220 211 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 GRB14Q14449 540 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 TMEM132BQ14DG7 1078 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 CCDC178Q5BJE1 867 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms