RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CCL15-CCL14A0A0B4J2E2 113 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 PRPF4BQ13523 1007 aaKnown RBP18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 CCL15Q16663 113 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 RABGAP1Q9Y3P9 1069 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 NUB1Q9Y5A7 615 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 LIG4P49917 911 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 TTC38Q5R3I4 469 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 IQUBQ8NA54 791 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 INO80Q9ULG1 1556 aaPredicted RBP18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 UQCRHP07919 91 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 TNNC2P02585 160 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 CFAP58Q5T655 872 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 PLEKHM2Q8IWE5 1019 aa18.94■□□□□ 0.62
SYNGAP1-202ENST00000418600 SPTLC2O15270 562 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 ATP6V0A1Q93050 837 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 PLVAPQ9BX97 442 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 TRPM1Q7Z4N2 1603 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 ZNF654Q8IZM8 581 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 GTF3C2Q8WUA4 911 aaPredicted RBP18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 CENPHQ9H3R5 247 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 YWHAEP62258 255 aaKnown RBP18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP44Q9H0E7 712 aa18.93■□□□□ 0.62
SYNGAP1-202ENST00000418600 N4BP3O15049 544 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 DAPK3O43293 454 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 KDM3AQ9Y4C1 1321 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 M0R2C6 588 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 KIF2AO00139 706 aaPredicted RBP18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 ELMOD1Q8N336 334 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 MICALL1Q8N3F8 863 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 COPRSQ9NQ92 184 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 ELF1P32519 619 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 RASSF7Q02833 373 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 RILPL1Q5EBL4 403 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 MAK16Q9BXY0 300 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 TMX3Q96JJ7 454 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 BACH2Q9BYV9 841 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 NSMCE1Q8WV22 266 aa18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 MRPL44Q9H9J2 332 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-202ENST00000418600 USP31Q70CQ4 1352 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 GAS8O95995 478 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 GTF2A2P52657 109 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 STRIP1Q5VSL9 837 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 hCG_1642624A0A1W2PR95 340 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 ZSCAN22P10073 491 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 KCNA4P22459 653 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 IFRD2Q12894 506 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 TNKSO95271 1327 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 LRRIQ4A6NIV6 560 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 GCNT3O95395 438 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 MCM3P25205 808 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 AK2P54819 239 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 ARPP19P56211 112 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 SPP2Q13103 211 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 CTAGE1Q96RT6 745 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 ZNF577Q9BSK1 485 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 DDX25Q9UHL0 483 aaKnown RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 MED23Q9ULK4 1368 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 ABCC4O15439 1325 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 CDHR2Q9BYE9 1310 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 RLBP1P12271 317 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 DMP1Q13316 513 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 TBC1D16Q8TBP0 767 aa18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 SH3RF3Q8TEJ3 882 aaPredicted RBP18.91■□□□□ 0.62
SYNGAP1-202ENST00000418600 SLC16A2P36021 539 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 IWS1Q96ST2 819 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 CNNM4Q6P4Q7 775 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 DENND3A2RUS2 1198 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 NT5C3AQ9H0P0 336 aa18.9■□□□□ 0.62
SYNGAP1-202ENST00000418600 MKRN1Q9UHC7 482 aaKnown RBP18.89■□□□□ 0.62
SYNGAP1-202ENST00000418600 NEMFO60524 1076 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 PLCD4Q9BRC7 762 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 ARHGEF37A1IGU5 675 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 E7EWF7 191 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 ZSCAN12O43309 604 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 FAM83BQ5T0W9 1011 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 FMNL3Q8IVF7 1028 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 TNNI1P19237 187 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 MMS19Q96T76 1030 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 GBA2Q9HCG7 927 aaPredicted RBP18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
SYNGAP1-202ENST00000418600 KRT9P35527 623 aa18.88■□□□□ 0.61
SYNGAP1-202ENST00000418600 PPP2R5AQ15172 486 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms